EST details — SGN-E248870

Search information 
Request: 248870Match: SGN-E248870
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C28795Clone name: cLEF-49-E10
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176984 is on microarray TOM1: SGN-S1-1-3.2.8.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176984 [TUS-25-F22] Trace: SGN-T182046 EST: SGN-E369557 Direction: 3' Facility: INRA
Clone: SGN-C176984 [TUS-25-F22] Trace: SGN-T182047 EST: SGN-E369558 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E248870Length: 340 bp (924 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E248870 [] (trimmed) CAAAGTAGAACGTTTTTACTGGGAACACTGGTATATAAATTTGAATGTGGCTCATCATCCGAAAGGTCATCCTGGCAAATCTCATCTCTCAAAAG
TAGTTGACCCAGGAGAGAGTGCATCTGAGGAGAGGAGTGCTCGGCGAACAGTGTTGGAATCATCTCTTCGTGAAGTTATGTTTCAGATAATAAAA
TTTGTAAATGAGAAAAAGGATCACATTCCTGCGATTTCAAATCTTGAGTGTGTCACTTTTCCCTATGAGATCACTATCTCAAGTTCATCAGATTC
TGCATTTGGGATGGATGTGATCAGGAGGATGCTCCAGACTGGGCCTCCGACCCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E248870] SGN-U584267 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T62378 [Download][View] Facility Assigned ID: TMGHL29TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0428 Quality Trim Threshold: 12.5