EST details — SGN-E247560
| Search information |
| Request: 247560 | Match: SGN-E247560 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26959 | Clone name: cLEF-42-B3 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176538 is on microarray TOM1: SGN-S1-1-1.4.9.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176538 [TUS-24-D8] | Trace: SGN-T193420 | EST: SGN-E392094 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176538 [TUS-24-D8] | Trace: SGN-T193421 | EST: SGN-E392095 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247560 | Length: 530 bp (969 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247560 [] (trimmed)
AAAACCCAACTTTTTCATCCGTGACCTAACGACGAAACTTCCATGTGTCTACACAAAACTTTTAACTCACATACTGTTTTAATTATATAGAAAAA
AAAAAAGTGTATTCCCTTTCTGATACTGCAATTTTTTTTCAAACAGATTCGATTCGATCCACCATTAGAATCCAATAATCACAAGTTTTTAAACC
CCACAACTCCAATTGCTGCACATCCTCTGTTTTTAAGATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTC
ATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTT
CTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAA
CATGAATCTCGGACTCATACTCATGCTCCACGACCAAAGCTTGATCGGAGATACT
AAAAAAGTGTATTCCCTTTCTGATACTGCAATTTTTTTTCAAACAGATTCGATTCGATCCACCATTAGAATCCAATAATCACAAGTTTTTAAACC
CCACAACTCCAATTGCTGCACATCCTCTGTTTTTAAGATAAGTTGACTTTGATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGGCAAGCTTC
ATCGACTCGATCTTCCTCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTACTCACAGCAGACGGCTGTTCCTT
CTTATGCACCACCACCACCATCCCAACAGAATTATCCCCCACAGCACCAACACAATTATTCTTCACAACCCCAACAGAATTATGCTTCTCATGAA
CATGAATCTCGGACTCATACTCATGCTCCACGACCAAAGCTTGATCGGAGATACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247560] | SGN-U577065 | Tomato 200607 | Build 2 | 35 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60604 [Download][View] | Facility Assigned ID: TMGGK02TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 20.5 |
Working
