EST details — SGN-E247517
| Search information |
| Request: 247517 | Match: SGN-E247517 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27216 | Clone name: cLEF-42-O15 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176670 is on microarray TOM1: SGN-S1-1-5.1.9.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176670 [TUS-24-I20] | Trace: SGN-T193088 | EST: SGN-E391762 | Direction: 5' | Facility: INRA |
| Clone: SGN-C176670 [TUS-24-I20] | Trace: SGN-T193335 | EST: SGN-E392009 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247517 | Length: 580 bp (941 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247517 [] (trimmed)
CTCAGGTGACTTTATTGCGTTTAATCATGATTTCAATCCTAATTCAGGCCTCAAAATCATCAAATCAGACGGTTCCAAGAAGTGGACATTGTTCA
GAGGCCGTACAGCTTTCTGCAACTCCTGGTCTCCAGCCGAACCCAATGTGATTTTTACGTCAATCGGACCTGTATTCGACTCTGTAAAAGCAACT
GTCCAAATAGCACGAGTTTCATTCAATTCATTAAATCTAACTAACGATGATTGCAGAGAAATTCCAGTAGAAATAAAAGTTCTCACAAAAGAGGA
GACGGGAAATAATGCCTTCCCTTCCTGCTCGCCAGACGGAAAGCACATTGTATTCCGTTCAGGCCGTGCAGGGCACAAAAATCTGTATATTATGG
ATTCTGTTAAGGGAGAGCTGGAGGGTGGAGGAATTCGTCAGCTAACAGAGGGGCCATGGATTGATACAATGCCAAGCTGGTCACCTGATGGAAAG
CTGATTGCATTTTCTTCCAACAGGCACAATCCGGATAATGTCACTTGCTTCAGCATTTATGTGATTCATCCAAACGGCACAGGTCTTCGTAGGAT
CCACGTGGCA
GAGGCCGTACAGCTTTCTGCAACTCCTGGTCTCCAGCCGAACCCAATGTGATTTTTACGTCAATCGGACCTGTATTCGACTCTGTAAAAGCAACT
GTCCAAATAGCACGAGTTTCATTCAATTCATTAAATCTAACTAACGATGATTGCAGAGAAATTCCAGTAGAAATAAAAGTTCTCACAAAAGAGGA
GACGGGAAATAATGCCTTCCCTTCCTGCTCGCCAGACGGAAAGCACATTGTATTCCGTTCAGGCCGTGCAGGGCACAAAAATCTGTATATTATGG
ATTCTGTTAAGGGAGAGCTGGAGGGTGGAGGAATTCGTCAGCTAACAGAGGGGCCATGGATTGATACAATGCCAAGCTGGTCACCTGATGGAAAG
CTGATTGCATTTTCTTCCAACAGGCACAATCCGGATAATGTCACTTGCTTCAGCATTTATGTGATTCATCCAAACGGCACAGGTCTTCGTAGGAT
CCACGTGGCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247517] | SGN-U584581 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60561 [Download][View] | Facility Assigned ID: TMGGI92TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |
Working
