EST details — SGN-E247412
| Search information |
| Request: 247412 | Match: SGN-E247412 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27985 | Clone name: cLEF-46-D20 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180651 is on microarray TOM1: SGN-S1-1-8.3.19.15
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180651 [TUS-34-O17] | Trace: SGN-T193525 | EST: SGN-E392199 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180651 [TUS-34-O17] | Trace: SGN-T193741 | EST: SGN-E392415 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247412 | Length: 595 bp (936 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247412 [] (trimmed)
CTCTATCAGTGTAGCTCTTAAACCCTAGGAATTTTTTTACATCTCTCCACGCCGATTCTATCTTTCTCTCCTCTCCACTCCACATCAATGGAAGA
TGTATGTGAAGGCAAAGATTTCTCTTTCCCAAATCAAGAAGAAAAAATCCTTCAATGGTGGGAAGAAGTCAAAGCATTCGAAAACCAGCTCGAAA
AGACAAAAAATCAACCCGAATACATTTTCTACGATGGTCCTCCATTTGCAACAGGTTTACCTCATTACGGCCACATATTAGCAGGTACAATCAAA
GATATTGTGACCAGGTATCAATCAATGACGGGTCATCATGTGACCCGAAGATTTGGGTGGGATTGTCATGGATTACCAGTTGAACATGAAATTGA
TGAGAAACTTCAGATTAAGACTAAACAACAAGTGATTGAAATGGGGATTGATAAGTATAATGAGGAATGTAGAGCTATTGTGACAAGGTATGTTG
GAGAATGGGAAAAAACTGTGGTGAGAATGGGGAGATGGATTGATTTTCAGAATGGGTATAAGACTATGGATTTGAAGTATATGGAGAGTCTTTGG
TGGGTTTTTGCTAAGCTGCATGAAA
TGTATGTGAAGGCAAAGATTTCTCTTTCCCAAATCAAGAAGAAAAAATCCTTCAATGGTGGGAAGAAGTCAAAGCATTCGAAAACCAGCTCGAAA
AGACAAAAAATCAACCCGAATACATTTTCTACGATGGTCCTCCATTTGCAACAGGTTTACCTCATTACGGCCACATATTAGCAGGTACAATCAAA
GATATTGTGACCAGGTATCAATCAATGACGGGTCATCATGTGACCCGAAGATTTGGGTGGGATTGTCATGGATTACCAGTTGAACATGAAATTGA
TGAGAAACTTCAGATTAAGACTAAACAACAAGTGATTGAAATGGGGATTGATAAGTATAATGAGGAATGTAGAGCTATTGTGACAAGGTATGTTG
GAGAATGGGAAAAAACTGTGGTGAGAATGGGGAGATGGATTGATTTTCAGAATGGGTATAAGACTATGGATTTGAAGTATATGGAGAGTCTTTGG
TGGGTTTTTGCTAAGCTGCATGAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247412] | SGN-U567896 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61823 [Download][View] | Facility Assigned ID: TMGHB22TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 12.5 |
Working
