EST details — SGN-E247256
| Search information |
| Request: 247256 | Match: SGN-E247256 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C28112 | Clone name: cLEF-46-J20 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176891 is on microarray TOM1: SGN-S1-1-8.3.8.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176891 [TUS-25-C1] | Trace: SGN-T181640 | EST: SGN-E369778 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176891 [TUS-25-C1] | Trace: SGN-T181641 | EST: SGN-E369779 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247256 | Length: 571 bp (940 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247256 [] (trimmed)
TTTTCCCCCTGTTTCTCTGTCAATAGAACACAAGGTTTGTGCTTAAAGCTTCACAATTTTCTTCTCCCTTTCAAGGATTTTTCTTGCTTCTGTTT
GGCTCTTTTTCACCTATTTATAGGTACCCACAAGGTTAAAATTAGCTTAAAGGTGGTGTATTAGCTAAATCCAACTTCTTTTTTCCTCTGAAAAT
CAAGAAAGTAGGCAAATTTGCTGTTTATCTTCAAGATTTTTGTGGGGTTTGGTTATTTACAGGTTCTTTGTGCCATTGCTATGTTCGCTCGTTAC
TGAAAGCTGGTTTCTAATTACTTAGTTGGGGTTCAGTAAAGCTAATAAACTTACTTGGGGTTCAGTAAAGCTTCTTTGACTACTTTGGTTGTACT
TACCAATTCAGATACTGTATCTATGAGGAGTTTTGGACGCGGGTCAAATTCCTTAAAATCAACTGAAACTATGAGGCTTATGCTCTCTGTATGCT
GCGGAATCATTTTTGGATTAATCATTGGAATTTCATTTCCTTCTAGCTCATTAACCAAGCTAAACATAACATCCAGTATTATAAGCAACTTCCCT
A
GGCTCTTTTTCACCTATTTATAGGTACCCACAAGGTTAAAATTAGCTTAAAGGTGGTGTATTAGCTAAATCCAACTTCTTTTTTCCTCTGAAAAT
CAAGAAAGTAGGCAAATTTGCTGTTTATCTTCAAGATTTTTGTGGGGTTTGGTTATTTACAGGTTCTTTGTGCCATTGCTATGTTCGCTCGTTAC
TGAAAGCTGGTTTCTAATTACTTAGTTGGGGTTCAGTAAAGCTAATAAACTTACTTGGGGTTCAGTAAAGCTTCTTTGACTACTTTGGTTGTACT
TACCAATTCAGATACTGTATCTATGAGGAGTTTTGGACGCGGGTCAAATTCCTTAAAATCAACTGAAACTATGAGGCTTATGCTCTCTGTATGCT
GCGGAATCATTTTTGGATTAATCATTGGAATTTCATTTCCTTCTAGCTCATTAACCAAGCTAAACATAACATCCAGTATTATAAGCAACTTCCCT
A
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247256] | SGN-U564401 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61667 [Download][View] | Facility Assigned ID: TMGHB58TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 14.5 |
Working
