EST details — SGN-E246826
| Search information |
| Request: 246826 | Match: SGN-E246826 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26860 | Clone name: cLEF-41-M3 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180497 is on microarray TOM1: SGN-S1-1-2.1.19.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180497 [TUS-34-I7] | Trace: SGN-T193493 | EST: SGN-E392167 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180497 [TUS-34-I7] | Trace: SGN-T199169 | EST: SGN-E397843 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246826 | Length: 532 bp (909 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246826 [] (trimmed)
GCTTCAGAGGGCTGGTTCATAAAGCTGCTTCAAGAAAACAAAAGATTTGTCACTAAGAACCCTAAAAAGGCTCACCTATTTTATTTGCCGATAAG
TTTCCGATCACTGAAGTTGACATTGTACGTGCCTGATTCTCACAACCGTACAAATATAATTCAATTTTTAAGTAACTATGTTGATATGATTGCGC
AAAAGTATCGTTTCTGGAATAGAACAGATGGAGCTGACCATTTTATTGTTGCCTGTCATGACTGGGCCCCTGCGGTGACGGATGAAATTATGAGT
AATTGCATAAGATCTTTATGCAATGCTGACCTGAGAGGTGGCTTCCAGCTTGGTAAAGATGTGTCTCTACCACAACCGAACATTCGCTTGAGCAC
GAACCCTCTTGCTGAACTTGGAGGGAAACCAGCATCCAAACGGCGTACCCTTGCTTTCTTTGCTGGACATATGCATGGTTATCTCCGCCCTGTAC
TACTGAAGCACTGGGAAAACAGAGATCCTGACATGAAGATTTATGGTGGAATAACCA
TTTCCGATCACTGAAGTTGACATTGTACGTGCCTGATTCTCACAACCGTACAAATATAATTCAATTTTTAAGTAACTATGTTGATATGATTGCGC
AAAAGTATCGTTTCTGGAATAGAACAGATGGAGCTGACCATTTTATTGTTGCCTGTCATGACTGGGCCCCTGCGGTGACGGATGAAATTATGAGT
AATTGCATAAGATCTTTATGCAATGCTGACCTGAGAGGTGGCTTCCAGCTTGGTAAAGATGTGTCTCTACCACAACCGAACATTCGCTTGAGCAC
GAACCCTCTTGCTGAACTTGGAGGGAAACCAGCATCCAAACGGCGTACCCTTGCTTTCTTTGCTGGACATATGCATGGTTATCTCCGCCCTGTAC
TACTGAAGCACTGGGAAAACAGAGATCCTGACATGAAGATTTATGGTGGAATAACCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246826] | SGN-U573756 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60241 [Download][View] | Facility Assigned ID: TMGGE74TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0117 | Quality Trim Threshold: 14.5 |
Working
