EST details — SGN-E246789

Search information 
Request: 246789Match: SGN-E246789
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C26614Clone name: cLEF-41-A5
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176374 is on microarray TOM1: SGN-S1-1-5.1.10.2
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176374 [TUS-23-M12] Trace: SGN-T181168 EST: SGN-E369130 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E246789Length: 577 bp (911 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E246789 [] (trimmed) GCGAGAACAACAACAATCAACCGACGACTCCACCCTACCTTCCCTACCGCCAGAGAAAAGTTCTGACCGGACACACACGCGCCGTCTCTTGCGTG
AAGTTCGCCAATAACGGACAACTCTTCGCTTCCGCCTCCTTGGACAAAACCCTAATCGTCTGGTCTACCCAAACCCTAACTCAGCTTTCACGTCT
CGTCGGCCATTCAGAAGGTGTCTCCGACCTATCATGGTCGTCTGATTCAAGTTACATATGCTCCGCCTCTGACGATCGCACGCTTCGTATTTGGG
ATGCACGCACAGCTGAGTCAGTCAAAACTCTCCGGGGACATACTGGGTTTGTGTTCTGCGTTAATTTCAATCCTCAGTCCAATCTCATAGTTTCA
GGTTCGTTTGATGAGACTTTTCGGGTCTGGGATGTGAAAACGGGCAAGCCAATCCACGCGATTAAGGCACATTCGATGCCAGTTACTTCGGTTCA
TTTCAACAAAGATGGATCTTTGATTGTTTCGGGTAGTCATGATGGGTCTTGTAAGATATGGGATATGGCTTCCGGAGCTTGCCTCAAGACTCTTA
TTGATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E246789] SGN-U566936 Tomato 200607 Build 2 13 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T60204 [Download][View] Facility Assigned ID: TMGGE03TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.989 Expected Error Rate: 0.0054 Quality Trim Threshold: 14.5