EST details — SGN-E246691
| Search information |
| Request: 246691 | Match: SGN-E246691 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27790 | Clone name: cLEF-45-I22 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176750 is on microarray TOM1: SGN-S1-1-5.1.9.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176750 [TUS-24-M4] | Trace: SGN-T193098 | EST: SGN-E391772 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176750 [TUS-24-M4] | Trace: SGN-T193099 | EST: SGN-E391773 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246691 | Length: 580 bp (879 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246691 [] (trimmed)
TTTTGTTTGAATTCAGACATCGGCGGCGAGTAAAGAGAAATGGAGAAAGAGGGAAAAAGCGATGCCGGTAATCGTACTATCACAGTGAATGTTAG
GTTCAGCGGTCGATCGATACCGGTGGAAATCTCCGACGAGTCCACTGTCAAACACCTCAAGTCTCTCCTTCAACCACTCACAAATGTCCTCTCTC
GCGGCCAAAAACTCATCTTCAAAGGGAAAGTTTTGGTGGATGAAGTGACATTGAAGTCATCGGAGGTCGGAAATGGTGCGAAGATCATGCTTATG
GCTTCCCAGGGCTTACATCAAGGGGATGGACCAATAAGAAAGGAAGCTTCCAACTTTCCCACAGCGAGGAGGATGCCTGAAGCTATGAGACCTAA
AAGGGATGTTCCTCAAGTTCCTGTTGTGAAGAGCCAACTTGAACGGTGGAAGGCCACCGGGGTTGTTGCATTATCAGAATGCAATCTGAAGGTCC
TGCCTGATGAAGTGTTGAACTGCGGACCTTCCGCTAGAGTCCTTGATCTCAGCCACAACGCCATACAGCATCTTCCAGCCACAATTAATAGCTTG
AGTTCTCTTC
GTTCAGCGGTCGATCGATACCGGTGGAAATCTCCGACGAGTCCACTGTCAAACACCTCAAGTCTCTCCTTCAACCACTCACAAATGTCCTCTCTC
GCGGCCAAAAACTCATCTTCAAAGGGAAAGTTTTGGTGGATGAAGTGACATTGAAGTCATCGGAGGTCGGAAATGGTGCGAAGATCATGCTTATG
GCTTCCCAGGGCTTACATCAAGGGGATGGACCAATAAGAAAGGAAGCTTCCAACTTTCCCACAGCGAGGAGGATGCCTGAAGCTATGAGACCTAA
AAGGGATGTTCCTCAAGTTCCTGTTGTGAAGAGCCAACTTGAACGGTGGAAGGCCACCGGGGTTGTTGCATTATCAGAATGCAATCTGAAGGTCC
TGCCTGATGAAGTGTTGAACTGCGGACCTTCCGCTAGAGTCCTTGATCTCAGCCACAACGCCATACAGCATCTTCCAGCCACAATTAATAGCTTG
AGTTCTCTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246691] | SGN-U567499 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61426 [Download][View] | Facility Assigned ID: TMGGV59TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0082 | Quality Trim Threshold: 14.5 |
Working
