EST details — SGN-E246172

Search information 
Request: 246172Match: SGN-E246172
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C26493Clone name: cLEF-40-J23
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176336 is on microarray TOM1: SGN-S1-1-3.3.10.5
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176336 [TUS-23-K22] Trace: SGN-T181238 EST: SGN-E369200 Direction: 3' Facility: INRA
Clone: SGN-C176336 [TUS-23-K22] Trace: SGN-T181239 EST: SGN-E369201 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E246172Length: 470 bp (887 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E246172 [] (trimmed) CTCTCCTTCACACTCTAATTTACAGTTTCAAAAAAAAAAAAAAAAAAAAAAATTCATCAAAATGTCACTTCGTCGTTCATTTCTCTCTCGAAGAA
TCATCAGTCGATCTTTTACATTTTCCAAATCATTCAAAGAATTCAAACTTCCAGAACCTTCTACTAGAGATGATTTCGCTGTTGGAGATGAACAA
AACGGCGCCGCCGGTGAATCGGATTCCGGCGATGCAACGTCGTCGTGGTCGAATATGTTGCCGGAGCTGTTGAGAGAGATTATACAGAGAGTGGA
AGCTACGGAGGACAGTTGGCCTCTACGTCAAAACGTCGTCGCTTGTGGATGTGTGTGTAAGAGATGGAGGCAAGTTACTGAGGATGTAGTTGAGT
CGTCTCTTCAGGCTGGGAAAATTACTTTTCCGTCTTGCCTTAAACAGCCAGGGCCTCGGGACCCTCCTCTTCAATGTTTCATCAAGCGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E246172] SGN-U585353 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T60024 [Download][View] Facility Assigned ID: TMGGC60TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0067 Quality Trim Threshold: 14.5