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EST details — SGN-E246115

Search information 
Request: 246115Match: SGN-E246115
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C26366Clone name: cLEF-40-C24
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176290 is on microarray TOM1: SGN-S1-1-1.1.10.5
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176290 [TUS-23-I24] Trace: SGN-T181228 EST: SGN-E369190 Direction: 3' Facility: INRA
Clone: SGN-C176290 [TUS-23-I24] Trace: SGN-T181229 EST: SGN-E369191 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E246115Length: 332 bp (932 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E246115 [] (trimmed) AAAGATTTGGAAATCGACGTTTGATCGGAGAAGAAATGGTGAAGTGTTATCCGACGGTGAGCGAAGAGTATCAAAAAGCAGTTGAAAAATGTAAG
AAGAAGCTCAGAGGACTTATCGCCGAGAAGAATTGTGCTCCGATTATGCTGAGATTAGCATGGCATTCAGCAGGGACATATGATGTCAAAACCAA
AACTGGTGGTCCATTTGGAACAATCAGGCACCCGAATGAACTTAAACATGGAGCTAACAATGGTCTTGATATTGCTGTTCGACTTTTGGAGCCGA
TCAAGGAACAGTTTCCAATCCTATCCTACGCTGACTTTTATTAGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E246115] SGN-U579887 Tomato 200607 Build 2 50 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T59967 [Download][View] Facility Assigned ID: TMGGB24TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0231 Quality Trim Threshold: 14.5