EST details — SGN-E244364
| Search information |
| Request: 244364 | Match: SGN-E244364 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26301 | Clone name: cLEF-3-O21 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180349 is on microarray TOM1: SGN-S1-1-6.3.19.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180349 [TUS-34-C3] | Trace: SGN-T193316 | EST: SGN-E391990 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180349 [TUS-34-C3] | Trace: SGN-T193317 | EST: SGN-E391991 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E244364 | Length: 594 bp (917 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E244364 [] (trimmed)
AAAAGTTCCTGGTTGACACTGTGTGATGTGGAAGATCCCAGGACTAAAGTTCCACAAAGTAAAGGCAAGTTCTTGGATGCAAATCAAGCTTTAGA
AGTTGCTAGATATGATCTACAATACTGTGATTGGAGAGCTAGGCAAGATGTACTTACTATAATGCTGCTACACGAAAAGGTTGTGGAAGTATTAA
ACCCTCTGGCACGCGATTATAAATCTATTGGAACCATGAAGAAGGAACTTGCAGAATTGCAAGAAGAACTTTCTCAGGCTCACAACCAGGTACAT
ATATCAGAGGCCCGGGTTTCTGCTGCTTTAGATAAGCTAGCTTACATGGAAGAATTGGTTAACGATAGGCTTCTGCAAGAGAGAAGCACAGTATA
ATCAGAATGCACGTCTTCCTCTGCAAGCACGTCAACAGGATTATTAGACACTCCAAAAAGCAAGCAACCACGAAGAACGCTGAATGTCTCAGGTC
CTGTCCAAGATTACAGTTCCCGTTTGAAGAACTTTTGGTACCCTGTTGCATTCTCCGCAGATCTTAAGAATGACACCATGGTACCGATTGATTGC
TTTGGGCGATCGTGGGTGATTCTT
AGTTGCTAGATATGATCTACAATACTGTGATTGGAGAGCTAGGCAAGATGTACTTACTATAATGCTGCTACACGAAAAGGTTGTGGAAGTATTAA
ACCCTCTGGCACGCGATTATAAATCTATTGGAACCATGAAGAAGGAACTTGCAGAATTGCAAGAAGAACTTTCTCAGGCTCACAACCAGGTACAT
ATATCAGAGGCCCGGGTTTCTGCTGCTTTAGATAAGCTAGCTTACATGGAAGAATTGGTTAACGATAGGCTTCTGCAAGAGAGAAGCACAGTATA
ATCAGAATGCACGTCTTCCTCTGCAAGCACGTCAACAGGATTATTAGACACTCCAAAAAGCAAGCAACCACGAAGAACGCTGAATGTCTCAGGTC
CTGTCCAAGATTACAGTTCCCGTTTGAAGAACTTTTGGTACCCTGTTGCATTCTCCGCAGATCTTAAGAATGACACCATGGTACCGATTGATTGC
TTTGGGCGATCGTGGGTGATTCTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E244364] | SGN-U580788 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T59345 [Download][View] | Facility Assigned ID: TMGAI95TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0060 | Quality Trim Threshold: 14.5 |
Working
