EST details — SGN-E240995

Search information 
Request: 240995Match: SGN-E240995
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C18625Clone name: cLED-24-B20
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C184252 is on microarray TOM1: SGN-S1-1-7.1.16.10
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184252 [TUS-44-E18] Trace: SGN-T198152 EST: SGN-E396826 Direction: 3' Facility: INRA
Clone: SGN-C184252 [TUS-44-E18] Trace: SGN-T198153 EST: SGN-E396827 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E240995Length: 387 bp (854 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E240995 [] (trimmed) TGAATTTGAAAGCATTAATGCCGGAAAGGACCCCAAGGATAAATTTGAGGAAACTAAAACTAAATTTCCAGAGAGAGCGAATTTTGGGTTTCCTG
TATCAGGTGGCATTGGACGCTTGCAGATTATAAAGAATGATGACCTCGAGGAGATTCGAGAATTGGGTTCTGGTACATTTGGCACTGTTTATCAT
GGAAAGTGGAGGGGTACTGATGTTGCAATTAAAAGGATTAATGACAGGTGTTTCGCTGGGAAAGCTTCAGAACAAGAGCGTATGAGGGATGATTT
CTGGAATGAGGCCATCAAACTTGCAGACTTGCACCATCCAAACGTTGTTGCCTTCTATGGTGTTGTGCTAGATGGTCCGGGTGGCTCGGTGGCGA
CTGTTAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240995] SGN-U564302 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T54892 [Download][View] Facility Assigned ID: TOVDR10TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.941 Expected Error Rate: 0.0071 Quality Trim Threshold: 14.5