EST details — SGN-C24072

Search information 
Request: 24072Match: SGN-C24072
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C24072Clone name: cLED-7-C12
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175191 is on microarray TOM1: SGN-S1-1-4.4.14.21
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175191 [TUS-20-L5] Trace: SGN-T1353 EST: SGN-E378510 Direction: 5' Facility: Giov. Lab
Clone: SGN-C175191 [TUS-20-L5] Trace: SGN-T190073 EST: SGN-E377574 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E231839Length: 677 bp (782 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E231839 [] (trimmed) CAGTGATGGTAAAACCCTTTATTCCAGAACATTTGCTTGGAACAAAGTTGCAAATGTGATGTTCCTAGAGTCACCAGCAGGGGTTGGCTTCTCCT
ATTCCAATACTAGCTCAGATTATGCACAATCAGGCGACAAGAGGACTGCTCAAGATGCATATAGGTTTCTAGTGAATTGGTTCAAGAGGTTTCCA
CATTACAAAAGCAGGGATTTTTACATCATGGGAGAAAGTTATGCAGGATTCTATGTGCCAGAGCTAGCAGACATCATTGTCAAGAGCAACATGCT
AGCAACCACAAACTCCAAGATCCAATTCAAAGGAATCATGATAGGAAATGGTATAATGAACGATGTCACAGATGAGAAAGGGCAATTAGATTATT
TATGGAGTCATGCACTAATCTCTGATGAGACTCATTTAGGCATCCAACAACATTGCAAAACCCAAACTGATGAGACAAAAATATGTGAACAATTT
CAAAGCACAGCTCAAACTGAGTTTGGAAACATAGATCCTTACAACATCTATGGTCCAATTTGTCCCCTTGATGACGACGATTCATCATCATCATC
ATCGTCATCAAGAAGAAGAATATTCAAGAAAAATGGATATGATCCTTGTGAACAACATTATGTTCGCCATTATCTCAATCTTCCTCAAGTTCAAA
AGTCTTTGCATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231839] SGN-U566079 Tomato 200607 Build 2 28 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T50348 [Download][View] Facility Assigned ID: TOVAZ18TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0064 Quality Trim Threshold: 14.5