EST details — SGN-C24014

Search information 
Request: 24014Match: SGN-C24014
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C24014Clone name: cLED-6-P19
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175152 is on microarray TOM1: SGN-S1-1-3.2.13.4
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175152 [TUS-20-J14] Trace: SGN-T190205 EST: SGN-E377983 Direction: 3' Facility: INRA
Clone: SGN-C175152 [TUS-20-J14] Trace: SGN-T190206 EST: SGN-E377984 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E233278Length: 591 bp (803 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E233278 [] (trimmed) GTTATGATTGCTGGAAAGGTTGCTCTTGTTGCTGGTTATGGAGATGTCGGCAAGGGATGTGCTGCTGCCATGAAACAAGCTGGTGCCCGTGTGAT
TGTGACTGAGATTGACCCAATCTGTGCTCTCCAGGCTACCATGGAAGGCCTCCAGGTTCTTCCTCTTGAGGATGTTGTTTCTGAGGTTGATATCT
TTGTGACCACCACCGGTAACAAGGACATCATCATGGTTGACCACATGAGGAAGATGAAGAACAATGCCATTGTCTGCAACATTGGTCACTTTGAC
AACGAAATCGACATGCATGGTCTTGAAACCTTCCCTGGTGTGAAGAGGATCACAATCAAGCCACAAACCGACAGATGGGTCTTCCCAGACACCAA
CAGTGGCATCATTGTGTTGGCCGAGGGTCGTCTCATGAACTTGGGATGTGCCACTGGACACCCCAGTTTTGTGATGTCTTGCTCTTTCACTAACC
AAGTCATTGCCCAACTCGAGTTGTGGAATGAGAGGAGCAGTGGCAAATACGAGAAGAAGGTGTACGTCTTGCCAAAGCACCTTGACGAGAAGGTT
GCTGCCCTTCATCTTGGAAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E233278] SGN-U577742 Tomato 200607 Build 2 274 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T50264 [Download][View] Facility Assigned ID: TOVAW94TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5