EST details — SGN-E239740

Search information 
Request: 239740Match: SGN-E239740
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C21426Clone name: cLED-33-O21
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C181649 is on microarray TOM1: SGN-S1-1-2.1.12.3
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C181649 [TUS-37-I7] Trace: SGN-T194317 EST: SGN-E392991 Direction: 3' Facility: INRA
Clone: SGN-C181649 [TUS-37-I7] Trace: SGN-T194318 EST: SGN-E392992 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E239740Length: 427 bp (708 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E239740 [] (trimmed) CAGTATACGCTTAATATCTCACGAGTGTTATGGAATCGATCTCCTGGAAGACTTCTTCAACTCAAAAAGGGTTCCAACAACAGATCTAGGAGCTT
GTAGCCTCAACCCGACAATCTTCGTTAAGAATCAGCCTTGTTGATAATTCCTCTTGAATCTTTTCTTCTACGCAGAATGAGCTCCAAAGAACTGA
TACCACTGTGAAGAGGTCCATCTCCAAGAGATGTGAATATGATGGTATCAGCTGCTCAAGCAAGATGATTTAGTTGATCACTCCATTTGGGTACA
CTGAAGCTCTTAAACTCAATGTTGTAAAATAAATGTATTAGATCCCTAGATAATACTTCAGATGATACTATAAAATGTGCTAAAGATAAAGAATC
TCCTTGTTTTACCCCTCTGATTGAGTGAAAGAAGTCATTAGATTCCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E239740] SGN-U577755 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T57013 [Download][View] Facility Assigned ID: TOVEY95TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0016 Quality Trim Threshold: 12.5