EST details — SGN-E239442
| Search information |
| Request: 239442 | Match: SGN-E239442 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C18347 | Clone name: cLED-23-A10 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C182516 is on microarray TOM1: SGN-S1-1-7.1.8.20
This clone has been mapped as P54.
| Additional sequencing |
| Clone: SGN-C182516 [TUS-39-M10] | Trace: SGN-T194895 | EST: SGN-E393569 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182516 [TUS-39-M10] | Trace: SGN-T194895 | EST: SGN-E398822 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182516 [TUS-39-M10] | Trace: SGN-T194896 | EST: SGN-E393570 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182516 [TUS-39-M10] | Trace: SGN-T194897 | EST: SGN-E393571 | Direction: 5' | Facility: INRA |
| Clone: SGN-C182516 [TUS-39-M10] | Trace: SGN-T200132 | EST: SGN-E398823 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E239442 | Length: 441 bp (786 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E239442 [] (trimmed)
GCATATCTTATCCATTCAACTCACTCAGATCGATCGATTCGATCGATGGGTCGAGGAAAGATAGAGATAAAGAGGATTGAAAACAACACAAATCG
ACAGGTAACATTCTGCAAGAGAAGAAATGGATTACTGAAAAAGGCATATGAACTTTCAGTTCTATGTGATGCTGAGATTGCTCTCATTGTTATCT
CTACTCGTGGTCGACTCTATGAATACTCTAACAACAATGTAAAGGCAACTATAGAACGATACAAAAAGGCAACAGCAGAAACGTCTAGTGCGTAC
ACTACTCAAGAGCTCAATGCACAGTTTTACCAACAAGAATCAAAGAAGGTGCGGCAACAGATACAAATGATGCAGAACACAAATAGGCATCTGGT
GGGTGAAGGGCTGAGCTCTTTGAATGTGAGGGAACTGAAGCAATTGGAGAACAGACTTGAA
ACAGGTAACATTCTGCAAGAGAAGAAATGGATTACTGAAAAAGGCATATGAACTTTCAGTTCTATGTGATGCTGAGATTGCTCTCATTGTTATCT
CTACTCGTGGTCGACTCTATGAATACTCTAACAACAATGTAAAGGCAACTATAGAACGATACAAAAAGGCAACAGCAGAAACGTCTAGTGCGTAC
ACTACTCAAGAGCTCAATGCACAGTTTTACCAACAAGAATCAAAGAAGGTGCGGCAACAGATACAAATGATGCAGAACACAAATAGGCATCTGGT
GGGTGAAGGGCTGAGCTCTTTGAATGTGAGGGAACTGAAGCAATTGGAGAACAGACTTGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E239442] | SGN-U585390 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T54407 [Download][View] | Facility Assigned ID: TOVDL05TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0198 | Quality Trim Threshold: 14.5 |
Working
