EST details — SGN-E237561

Search information 
Request: 237561Match: SGN-E237561
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C17237Clone name: cLED-19-B14
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175861 is on microarray TOM1: SGN-S1-1-6.4.11.5
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175861 [TUS-22-H3] Trace: SGN-T180762 EST: SGN-E368013 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E237561Length: 509 bp (887 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E237561 [] (trimmed) GGTGCTGATGGAATTCGGCACGAGGCTGGACAATTTCTAACATCACGGCTGGCAACCGGGAGCAAATTCATGTGTGGTTGACGCTGGTATTATAG
GTCCCCTTGTTAATTTGCTACAAAATGCGGAGTTTGAAATAAAAAAGGAGGCTGCATGGGCAATTTCAAATGCCACATCTGGTGGTTCACATGAG
CAGATCAAGTACCTTGTTAGTCAAGGTTGTATCAAGCCATTGTGTGATCTTCTCATTTGTCCTGACCCAAGGATTGTCACAGTTTGTCTTGAAGG
GCTTGAAAATATTTTGAAGGTTGGGGAAGCTGAGAAGAGTTTGGGCCGGACATCAGATATAAATCTTTATGCTCAGCTGATTGATGACGCTGAAG
GTTTAGAAAAAATTGAGAATCTTCAAAGCCATGACAATCAAGAGATCTATGAAAAGGCAGTTAAGATTCTTGAGACGTACTGGTTGGAAGAAGAT
GACGAGACCATGCCACCTGGTGATGCAGCCCAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E237561] SGN-U585653 Tomato 200607 Build 2 35 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T53475 [Download][View] Facility Assigned ID: TOVCX07TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0121 Quality Trim Threshold: 14.5