EST details — SGN-E235680
| Search information |
| Request: 235680 | Match: SGN-E235680 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C16185 | Clone name: cLED-15-H3 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C169219 [TUS-5-C9] | Trace: SGN-T351085 | EST: SGN-E550210 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E235680 | Length: 634 bp (828 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E235680 [] (trimmed)
GTCTCAGAATCAGCGGACTTTCTGGGTCGTAGGTCGTATCCGGGATCGATAAGACTAGAAACGCAACGGATACGAATATTCCCCACGGAGGCCCT
GTCGTCGTCGCGACTGACGACTTGCCGCGGGCTACGAACGCGGCCCTACTCCATGTATTGAACATATCCCTCGCGGCTCATGACAGGGGCTCCAC
CGGAATAACCTACGATCGGCGCGAGGTCCCTCTAATACACTTCTGGATACATGACTCCTCGTACTCCGACGGTTCTCCTCTCGTTGAAAGCTACA
GACGCGAAACGAAACACGCCTCCTCGGAAACGGACTGCACCCCATGGTTTAATGGCCACGTCACAACTTGAGAACTTAGTCACCCTGCAGATATC
ACCGTCATCACGGTCAAGGGGACGAGACGGAGTCGCTGCAAGGAAGAAATAGAACATGGTGCAGAGAAGGAGAAGACACCGACCCGTTAGAAGAA
GCCACGGCACCTAAAGTAAAACCTACGAATAATCCCGAATACTACAGTACAAAATATAGCCGTCGACAACGGAGAGAAAAAGCCACACACCCAAC
ACCGGTACTACAGGAGACAAGCAAGCTTACATAGTCCACACACCACACACACACTACCCCGCCT
GTCGTCGTCGCGACTGACGACTTGCCGCGGGCTACGAACGCGGCCCTACTCCATGTATTGAACATATCCCTCGCGGCTCATGACAGGGGCTCCAC
CGGAATAACCTACGATCGGCGCGAGGTCCCTCTAATACACTTCTGGATACATGACTCCTCGTACTCCGACGGTTCTCCTCTCGTTGAAAGCTACA
GACGCGAAACGAAACACGCCTCCTCGGAAACGGACTGCACCCCATGGTTTAATGGCCACGTCACAACTTGAGAACTTAGTCACCCTGCAGATATC
ACCGTCATCACGGTCAAGGGGACGAGACGGAGTCGCTGCAAGGAAGAAATAGAACATGGTGCAGAGAAGGAGAAGACACCGACCCGTTAGAAGAA
GCCACGGCACCTAAAGTAAAACCTACGAATAATCCCGAATACTACAGTACAAAATATAGCCGTCGACAACGGAGAGAAAAAGCCACACACCCAAC
ACCGGTACTACAGGAGACAAGCAAGCTTACATAGTCCACACACCACACACACACTACCCCGCCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E235680] | SGN-U601245 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T52253 [Download][View] | Facility Assigned ID: TOVCG38TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 20.5 |
Working
