EST details — SGN-E235301

Search information 
Request: 235301Match: SGN-E235301
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C15175Clone name: cLED-11-C22
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175390 is on microarray TOM1: SGN-S1-1-5.4.13.14
See unigene SGN-U582213 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C175390 [TUS-21-D12] Trace: SGN-T190645 EST: SGN-E378031 Direction: 3' Facility: INRA
Clone: SGN-C175390 [TUS-21-D12] Trace: SGN-T190646 EST: SGN-E378032 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E235301Length: 450 bp (787 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E235301 [] (trimmed) AGAAGTAACAGATTTAGTAGTAATTATAATTGGCATCACACAATTGGAGTTAAAATATGTGAATCTAATGACGGTTTACGCTAAAACTGTAAAGT
AAGCGCTTCTCGAAATGCATTACAATAGCAGCAAAACAATTGTAACTAAAACTATCTATACTAGCATTTCTTTCAATGGTCGCTACATACTTGGT
GAAAAGCGCTTAGCATATGCCAATGAAAGGTGAAAGAAATAAAGAATAAAGAGGACTCTCGACATATTTGAAAGCAGATCATCATTTTCACTTTG
ATTTCAGAGTTTGAAGATCAGTTTCGTTTAGAAACGAAGGCATAACTTTAATTGGTTGAAAAGTGAAACCAGCTTTGTGGCATGCGTCCTCCAGC
TGCTTCACTTGTGAAGTTCCATCCGGACAGTACACAACCACAGCCCCACCACTTCCTGTGAACTTGGAAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E235301] SGN-U582213 Tomato 200607 Build 2 26 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T51311 [Download][View] Facility Assigned ID: TOVBP23TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0070 Quality Trim Threshold: 12.5