EST details — SGN-E233659
| Search information |
| Request: 233659 | Match: SGN-E233659 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C15905 | Clone name: cLED-14-G24 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C181418 is on microarray TOM1: SGN-S1-1-1.3.14.2
See unigene SGN-U578039 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C181418 [TUS-36-O16] | Trace: SGN-T193590 | EST: SGN-E392264 | Direction: 5' | Facility: INRA |
| Clone: SGN-C181418 [TUS-36-O16] | Trace: SGN-T193823 | EST: SGN-E392497 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E233659 | Length: 545 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E233659 [] (trimmed)
CAGGCTTCTGGGGTTGAGTTGAGTTACCGATAACGTCCATTTTCTTAGCGGGGTTTCTAATATATTCTTTGATTTTGTTGAATAGGTCCATTTGC
TTACACAAAAATTGCATATAAGGGAGAAAGGAAAGGAAAACTCAGAGCAAAGTGAACCAATTAGTCCAATAGACACACAAGAGGCTCAAAAAGCA
ACAACTCCAATTGTTGTTACCTCAAATGTACCAAAGTTAATGTGCAAACAAGAAGATGCAACATCAGCAAAAAGTGATGTTATTGATTCAGATAG
CCCACATTACACTGATGGGAATCATTCATCAAATGTATTTGAACAAGAGCCATCTGATTTTTCTCGAGATGAAGATGACAACCTAAGCAAGAACT
TTCTATATTTCCCCGAAATCGGAGATCAAATTCAAGCGAATTCATGCAATTTGAGTTTCCAAATTGAAGATCAACCTTGTTGGTTCTGGCAATAT
TGAGTTGTTAGGTTACAAGATTTGGCTCGATCCTACTTTAGATCAGTATAAATCCCACAAGTGGAGTCTG
TTACACAAAAATTGCATATAAGGGAGAAAGGAAAGGAAAACTCAGAGCAAAGTGAACCAATTAGTCCAATAGACACACAAGAGGCTCAAAAAGCA
ACAACTCCAATTGTTGTTACCTCAAATGTACCAAAGTTAATGTGCAAACAAGAAGATGCAACATCAGCAAAAAGTGATGTTATTGATTCAGATAG
CCCACATTACACTGATGGGAATCATTCATCAAATGTATTTGAACAAGAGCCATCTGATTTTTCTCGAGATGAAGATGACAACCTAAGCAAGAACT
TTCTATATTTCCCCGAAATCGGAGATCAAATTCAAGCGAATTCATGCAATTTGAGTTTCCAAATTGAAGATCAACCTTGTTGGTTCTGGCAATAT
TGAGTTGTTAGGTTACAAGATTTGGCTCGATCCTACTTTAGATCAGTATAAATCCCACAAGTGGAGTCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E233659] | SGN-U578039 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T52013 [Download][View] | Facility Assigned ID: TOVCB48THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |
Working
