EST details — SGN-E232039
| Search information |
| Request: 232039 | Match: SGN-E232039 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C24353 | Clone name: cLED-7-O8 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C175356 is on microarray TOM1: SGN-S1-1-7.3.13.10
See unigene SGN-U577347 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C175356 [TUS-21-C2] | Trace: SGN-T190443 | EST: SGN-E377393 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E232039 | Length: 647 bp (776 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E232039 [] (trimmed)
CTAGATTCTTTCTTCTATGGAGTCAATACTTGTTCAATACTAATAATTGAAGGGCTCAATTACCGCATTTTAGCTTCGATCCATTCATTGCCTTT
GAATCCCCTTGCTTTTCTTCTGAATCGGTTTTGGGTGTTTGCAAACTTCTGATATTTCCAATTCAAATAAAACTGAGTGAGATGCAGGACTCAAC
TACCAGGGCATTTGAAAGCTCTTCTTCTTCCTCTGGAGATGGGAACAATGATGCTGGTGATTTTGAATGCAACATATGTTTTGAATTGGCCCAAG
ATCCCATTGTGACACTCTGTGGTCACCTTTTCTGTTGGCCATGTCTGTATAGATGGTTACGTCTTCACTCACAGTGCCATGAATGCCCTGTCTGT
AAGGCACTTATTCAAGAGGAGAAGTTAGTTCCACTTTATGGAAGAGGAAGAACTTCTACTGATCCCCGATCAAAACCAATTCCTGGCCTTGAAAT
TCCTAGTAGACCTGCTGGACAACGACCTGAAACTGCTCCTCAACCTGAACCAAATCATTTTCCTAATCATGGATTTGGGCACATGGGAGGATTGT
TTCCAACAGCAACTGCAAGATTTGGTAATTTTACTATGTCTGCTGGTTTTGGTGGATTGCTCCCTTCATTGCTCAGC
GAATCCCCTTGCTTTTCTTCTGAATCGGTTTTGGGTGTTTGCAAACTTCTGATATTTCCAATTCAAATAAAACTGAGTGAGATGCAGGACTCAAC
TACCAGGGCATTTGAAAGCTCTTCTTCTTCCTCTGGAGATGGGAACAATGATGCTGGTGATTTTGAATGCAACATATGTTTTGAATTGGCCCAAG
ATCCCATTGTGACACTCTGTGGTCACCTTTTCTGTTGGCCATGTCTGTATAGATGGTTACGTCTTCACTCACAGTGCCATGAATGCCCTGTCTGT
AAGGCACTTATTCAAGAGGAGAAGTTAGTTCCACTTTATGGAAGAGGAAGAACTTCTACTGATCCCCGATCAAAACCAATTCCTGGCCTTGAAAT
TCCTAGTAGACCTGCTGGACAACGACCTGAAACTGCTCCTCAACCTGAACCAAATCATTTTCCTAATCATGGATTTGGGCACATGGGAGGATTGT
TTCCAACAGCAACTGCAAGATTTGGTAATTTTACTATGTCTGCTGGTTTTGGTGGATTGCTCCCTTCATTGCTCAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E232039] | SGN-U577347 | Tomato 200607 | Build 2 | 19 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T50548 [Download][View] | Facility Assigned ID: TOVAZ88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 14.5 |
Working
