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EST details — SGN-E231886

Search information 
Request: 231886Match: SGN-E231886
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C24143Clone name: cLED-7-F19
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C184207 is on microarray TOM1: SGN-S1-1-4.3.16.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184207 [TUS-44-C21] Trace: SGN-T191872 EST: SGN-E390546 Direction: 5' Facility: INRA
Clone: SGN-C184207 [TUS-44-C21] Trace: SGN-T192110 EST: SGN-E390784 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E231886Length: 594 bp (794 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E231886 [] (trimmed) GAAAAAGAGTCCTTCATCAACAATCGGTGATTTGGAAGGTTCAACTAAGAGTCACAAGAAGAAGAAAGCGCGTGAACCAAAAGACGACCAGGAGG
AGGGACCTGAAGTGATGAAGGCTAATGATGAGAGATCAGATGATGAGATGTCAAAACGAACTAAAACTGAGGAGAAAGACGGTAAATCTGAAGAA
GGATCCAAGAAGGACAAGAAGAAGCATAAGCGAAGCTCAAATAAATCATCCTCAAAGAAGGAAGCTGGAGAAGTTAAAACCAAGAAAACTCCTTC
AAATTCATCAAAAAGCTCAAAGAAAAATGATAACAACGATGCAAATTCAGAAGTGCATTCAAAGAAGAAAACTACTGAAGTAGTTAAGGGAAATT
CATCTACACCAAAAAAACCTAGTTCAAAAGACAAAACTGGGAAAAAAGATCCGAATGGGAAGGGCCATAAGAAAGCGAATAAATTGAAGCCAAGT
GATGATGAACTTCAAAGTGCAATTTGTGAAGTTCTAAAAGAAGTTGACTTTAATACGGTCACCTTTACCGACATTGTGCAAATGCTTGCCAAGCG
GTATGATACCGATCTTACACTCAG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231886] SGN-U576784 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T50395 [Download][View] Facility Assigned ID: TOVBA34TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.901 Expected Error Rate: 0.0083 Quality Trim Threshold: 14.5