EST details — SGN-E231680

Search information 
Request: 231680Match: SGN-E231680
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C23152Clone name: cLED-4-K12
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174516 is on microarray TOM1: SGN-S1-1-7.4.16.16
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174516 [TUS-18-P2] Trace: SGN-T1315 EST: SGN-E378249 Direction: 5' Facility: Giov. Lab
Clone: SGN-C174516 [TUS-18-P2] Trace: SGN-T197385 EST: SGN-E396059 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E231680Length: 501 bp (1169 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E231680 [] (trimmed) CTCCGGTGAACTCCGATTTGGTAGAAGTTTGTACATCGGAGATGTGTGAATATGCTCCTGAAGTGATAGATGAACCAGAAGTGTTTGAGGAGAAG
ACCGAAGGGGTAATTGAACCGCTGGAGTTGGTTGAAGTAAAATCAATGGTGACTATAGTGAATGAAAACGAAGGTGAAAATGATGAATTTGTGAG
TTCGAATTCGGTTTTTACGCCGTTGCCGGAAGTAGAAACGGAGTTAATTCAACGGCTAACGACTGAGAAACCGCTAGTTACTTCGAGGTTCAGTC
ATCGGAAACCGCTGATGAGGACGAGTCCTGAAGGGGTGAAATCACTAAGGGTGGCTAGAGTAAAGAGGCAAGAGACATTAGAGAGTACATGGAAG
AAGATAACGGAAAGGCGTCACGTGCCTCTCACGAGGCACCTGAACAAGTTAGACACGTGGCAACATCATAACCAGAACCGGAGAAGTGAATCCCC
GTTTCAAAATATTAAAAAAGCACTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231680] SGN-U574681 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49449 [Download][View] Facility Assigned ID: TOVAN66TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.962 Expected Error Rate: 0.0131 Quality Trim Threshold: 14.5