EST details — SGN-E231416

Search information 
Request: 231416Match: SGN-E231416
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C22925Clone name: cLED-4-A15
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174343 is on microarray TOM1: SGN-S1-1-4.4.15.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174343 [TUS-18-H21] Trace: SGN-T197253 EST: SGN-E395927 Direction: 3' Facility: INRA
Clone: SGN-C174343 [TUS-18-H21] Trace: SGN-T199856 EST: SGN-E398530 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E231416Length: 536 bp (804 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E231416 [] (trimmed) TTTGTAATTATAGCAAGTGACCCTGTTGAGGCAACAAGAAAGACAGCAGTTAGCGGAGGAGATAGCGCATGTATCTGCACTAAATTCTCAAAAGC
AGGATTTGGAAGAGAAGCTTGCTGTTATGTCCAAAAAGGTCTCAGGTGAAGTCACCGGAAAGGCATCCCAGAAGACATTCTCAGAGGGAGACAAG
GTGAGGCTTGAAAAGCAATTACATGATATGGCAGTGGCTATTGAAAGATTGGAAAGTAGCCGGCAGAAACTTCTTACGGAGGTCGATTCACAATC
CTCGGAGATAGAGAGACTATTTGAGGAAAATTCTAATCTTTCTTCCGCTCATCAAGAAGCTTTAGGGGTGGCGGTGCAGTGGGAGAATCAGGTAA
AAGATTGTCTCAAGCAAAATGAGGAGCTTCGTGTTATGTTAGATAAGTTAAGGAATGACCAAACTGCAATAGCAACTGCAAACAACAACCTGATC
CAGCAAGGTGTCAAAGGCAGCAAAAATGAAATTCAAGGCATAGAATATGCTGACATCATAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231416] SGN-U584696 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49185 [Download][View] Facility Assigned ID: TOVAM08TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.957 Expected Error Rate: 0.0050 Quality Trim Threshold: 14.5