EST details — SGN-E231280

Search information 
Request: 231280Match: SGN-E231280
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C23454Clone name: cLED-5-H10
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C174710 is on microarray TOM1: SGN-S1-1-5.4.15.5
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C174710 [TUS-19-H4] Trace: SGN-T189560 EST: SGN-E377206 Direction: 3' Facility: INRA
Clone: SGN-C174710 [TUS-19-H4] Trace: SGN-T189561 EST: SGN-E377207 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E231280Length: 383 bp (470 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E231280 [] (trimmed) TCACAAGTAGTAGTTGGTTACCACTAGTTCTTATCATTTTCCCAAAATAAAATTGAAATTTCAAGATTCCAAATATTTCAAGAACATTAGACATG
GGATTATATGAATCATGTTGTGTTATAGTCCTATATTTTATGTTCTTACTTTTGAATCCTCAATTTTCATGTTCCATGTCATGTACAACACAAAA
GTTCACCAGCAACAAATTGTATGAACATTGCAATGACTTGCCACATTTGAATTGTTACCTTCATTGGACTTACAATCCAAAAATTTCTTCTTTAA
ATTTAGCATTTGCAGCTACTCCTACTAAGCCTAATGGATGGATTTCATGGGGAATCAATCCAAATGGGACGGGAATGATTGGTACACAATCGTTG
ATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231280] SGN-U571166 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T49896 [Download][View] Facility Assigned ID: TOVAT41TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.927 Expected Error Rate: 0.0002 Quality Trim Threshold: 14.5