EST details — SGN-E230941
| Search information |
| Request: 230941 | Match: SGN-E230941 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C23301 | Clone name: cLED-5-A21 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C174614 is on microarray TOM1: SGN-S1-1-5.4.15.4
See unigene SGN-U579445 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C174614 [TUS-19-D4] | Trace: SGN-T189541 | EST: SGN-E377187 | Direction: 3' | Facility: INRA |
| Clone: SGN-C174614 [TUS-19-D4] | Trace: SGN-T189542 | EST: SGN-E377188 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E230941 | Length: 504 bp (827 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E230941 [] (trimmed)
GTTAAACATGGCTTCTTCTTCTAAATTAGTACTAGTAATGTGCTTTATGATTAGTGCTTTTGGCATTGCAATTGGGGCCAAGTTTGATCAAGAAT
TCGACATTACATGGGGTGATGGCAGAGCAAAAATACTTAACAATGGCGACCTCCTTACTCTCTCACTTGACAAAATCTCAGGCTCTGGTTTTCAA
TCCAAGAATGAATATCTGTTTGGTAAAATTGACATGCAGCTCAAACTTGTCCCAGGAAATTCTGCTGGCACTGTCACTGCTTACTATTTGTCATC
ACAAGGACCAACACATGATGAGATAGATTTTGAATTCTTGGGAAATTTAAGTGGTGATCCTTATACTCTCCATACTAATGTATTTAGTCAAGGCA
AAGGAAACAGAGAACAACAATTTCATCTCTGGTTTGACCCTACTGCTGATTTCCACACGTATTCCATCACTTGGAATCCGCAACGCATCATATTT
TATGTGGACGGAACGCCAATTAGAGAATA
TCGACATTACATGGGGTGATGGCAGAGCAAAAATACTTAACAATGGCGACCTCCTTACTCTCTCACTTGACAAAATCTCAGGCTCTGGTTTTCAA
TCCAAGAATGAATATCTGTTTGGTAAAATTGACATGCAGCTCAAACTTGTCCCAGGAAATTCTGCTGGCACTGTCACTGCTTACTATTTGTCATC
ACAAGGACCAACACATGATGAGATAGATTTTGAATTCTTGGGAAATTTAAGTGGTGATCCTTATACTCTCCATACTAATGTATTTAGTCAAGGCA
AAGGAAACAGAGAACAACAATTTCATCTCTGGTTTGACCCTACTGCTGATTTCCACACGTATTCCATCACTTGGAATCCGCAACGCATCATATTT
TATGTGGACGGAACGCCAATTAGAGAATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E230941] | SGN-U579445 | Tomato 200607 | Build 2 | 169 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T49557 [Download][View] | Facility Assigned ID: TOVAQ11TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 14.5 |
Working
