EST details — SGN-E228359
| Search information |
| Request: 228359 | Match: SGN-E228359 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C22704 | Clone name: cLED-3-B17 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C184020 is on microarray TOM1: SGN-S1-1-7.4.19.18
This clone has been mapped as P27.
| Additional sequencing |
| Clone: SGN-C184020 [TUS-43-L2] | Trace: SGN-T197970 | EST: SGN-E396644 | Direction: 5' | Facility: INRA |
| Clone: SGN-C184020 [TUS-43-L2] | Trace: SGN-T198120 | EST: SGN-E396794 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E228359 | Length: 562 bp (872 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E228359 [] (trimmed)
CTTTGGAAGTTGTGTGAGTTTTCAGAAAGCCTTTGAAGTTCGCCGGAAAATAGCAATATTTTCAATTCAAGCCAATCAGATGGGAAGAGGAAAGA
TAGAGATAAAGAGGATAGAGAACAACACAAACAGGCAGGTTACATTTTGCAAGAGAAGAAATGGATTGTTGAAGAAAGCCTATGAACTCTCTGTT
CTATGTGAAGCTGAGATTGCTCTTATTGTTTTCTCCACACGTGGACGCGTCTATGAATACTCTAACAACAACATTAAGGCAACTATTGAACGATA
CAAGAAGGCAACTGCTGAAACCTCTAATGCTTGCACCACTCAAGAGCTCAATGCTCAGTTTTATCAACAAGAATCAAAAAAGCTGCGCCAACAGA
TACAAATGATGCAGAATTCAAACAGGCATCTGGTTGGTGAAAGATTAAGTTGTTTGAACGTAAGAGAGCTGAAGCAGTTGGAAAATATACTTGAA
CGAGGCATCAGCAGAATCAGATCAAAAAAGCATGAGATGATACTGGCTGAAACTGAGAATTTGCAGAAGAGGGAAATTCTACTGGAA
TAGAGATAAAGAGGATAGAGAACAACACAAACAGGCAGGTTACATTTTGCAAGAGAAGAAATGGATTGTTGAAGAAAGCCTATGAACTCTCTGTT
CTATGTGAAGCTGAGATTGCTCTTATTGTTTTCTCCACACGTGGACGCGTCTATGAATACTCTAACAACAACATTAAGGCAACTATTGAACGATA
CAAGAAGGCAACTGCTGAAACCTCTAATGCTTGCACCACTCAAGAGCTCAATGCTCAGTTTTATCAACAAGAATCAAAAAAGCTGCGCCAACAGA
TACAAATGATGCAGAATTCAAACAGGCATCTGGTTGGTGAAAGATTAAGTTGTTTGAACGTAAGAGAGCTGAAGCAGTTGGAAAATATACTTGAA
CGAGGCATCAGCAGAATCAGATCAAAAAAGCATGAGATGATACTGGCTGAAACTGAGAATTTGCAGAAGAGGGAAATTCTACTGGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E228359] | SGN-U585391 | Tomato 200607 | Build 2 | 23 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T49007 [Download][View] | Facility Assigned ID: TOVAK09TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0088 | Quality Trim Threshold: 14.5 |
Working
