EST details — SGN-E228256
| Search information |
| Request: 228256 | Match: SGN-E228256 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C20319 | Clone name: cLED-2-B4 |
| ||
| Library Name: cLED | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis
Microarray: Alias clone SGN-C182412 is on microarray TOM1: SGN-S1-1-7.1.8.15
This clone has been mapped as P26.
| Additional sequencing |
| Clone: SGN-C182412 [TUS-39-I2] | Trace: SGN-T194876 | EST: SGN-E393550 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182412 [TUS-39-I2] | Trace: SGN-T194876 | EST: SGN-E398818 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182412 [TUS-39-I2] | Trace: SGN-T194877 | EST: SGN-E393551 | Direction: 3' | Facility: INRA |
| Clone: SGN-C182412 [TUS-39-I2] | Trace: SGN-T194878 | EST: SGN-E393552 | Direction: 5' | Facility: INRA |
| Clone: SGN-C182412 [TUS-39-I2] | Trace: SGN-T200432 | EST: SGN-E399502 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E228256 | Length: 568 bp (974 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E228256 [] (trimmed)
CAGATTAAAACCTCTTTCTCCTACCTGGGGAGATCCTTCCACTTCCCAATAACGATACAGTTTTTTAATTTATCATTTGCCAAAAACAAAGAATT
ACTAAACATAAATATCCATTTCCATTACACAATATACATATATATACACACACAAAGAAGAAAGAAGAAAGAAGAAATTAATATGGGTAGAGGAA
GAGTACAATTGAAGAGAATTGAGAACAAAATTAATCGTCAAGTTACTTTTTCAAAGAGGCGATCTGGTTTGCTTAAAAAAGCTCATGAGATCTCT
GTGCTTTGCGATGCTGAAGTTGGACTCATTGTTTTCTCAACTAAAGGAAAACTCTTTGAGTATTCTACTGACTCTTGCATGGAAAGGATTCTTGA
AAGGTATGAAAGGTACTCATATGCTGAAAGGCAGCTTAATGCTACTGATATTATAACCCCGGGTAGCTGGACTTTGGAACATGCTAAGCTTAAGG
CCAGACTTGAGGTTTTGCAAAGAAACCAAAAGCATTATGCAGGAGAAGAGTTGGACACATTGAGTATGAAAGAGCTTCAGAATCTGGAACACC
ACTAAACATAAATATCCATTTCCATTACACAATATACATATATATACACACACAAAGAAGAAAGAAGAAAGAAGAAATTAATATGGGTAGAGGAA
GAGTACAATTGAAGAGAATTGAGAACAAAATTAATCGTCAAGTTACTTTTTCAAAGAGGCGATCTGGTTTGCTTAAAAAAGCTCATGAGATCTCT
GTGCTTTGCGATGCTGAAGTTGGACTCATTGTTTTCTCAACTAAAGGAAAACTCTTTGAGTATTCTACTGACTCTTGCATGGAAAGGATTCTTGA
AAGGTATGAAAGGTACTCATATGCTGAAAGGCAGCTTAATGCTACTGATATTATAACCCCGGGTAGCTGGACTTTGGAACATGCTAAGCTTAAGG
CCAGACTTGAGGTTTTGCAAAGAAACCAAAAGCATTATGCAGGAGAAGAGTTGGACACATTGAGTATGAAAGAGCTTCAGAATCTGGAACACC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E228256] | SGN-U581535 | Tomato 200607 | Build 2 | 47 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T48904 [Download][View] | Facility Assigned ID: TOVAH02TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.946 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 14.5 |
Working
