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EST details — SGN-E202366

Search information 
Request: 202366Match: SGN-E202366
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C10776Clone name: cLEC-6-D8
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172668 is on microarray TOM1: SGN-S1-1-7.3.20.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172668 [TUS-14-C2] Trace: SGN-T195207 EST: SGN-E393881 Direction: 3' Facility: INRA
Clone: SGN-C172668 [TUS-14-C2] Trace: SGN-T195208 EST: SGN-E393882 Direction: 5' Facility: INRA
Clone: SGN-C172668 [TUS-14-C2] Trace: SGN-T195775 EST: SGN-E394449 Direction: 3' Facility: INRA
Clone: SGN-C172668 [TUS-14-C2] Trace: SGN-T195775 EST: SGN-E399022 Direction: 3' Facility: INRA
Clone: SGN-C172668 [TUS-14-C2] Trace: SGN-T200204 EST: SGN-E399023 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202366Length: 592 bp (764 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202366 [] (trimmed) TAATGGGATACTCCAATATTGCTTTAATCATTTGTTTCCTTACCTTTGCTATATTTCACTCATCACAAGCTCAAAACTCCCCTCAAGATTATCTT
AACGCTCACAATGCAGCTCGTAGACAAGTTGGAGTCGGTCCTATGACATGGGACAATAGGCTAGCGGCCTTTGCCCAAAATTACGCCAATCAAAG
AGCTGGGGACTGCAGGATGCAACACTCTGGTGGACCTTACGGTGAAAACCTAGCTGCCGCTTTCCCCCAGCTCAACGCGGCTGGTGCTGTGAAGA
TGTGGGTTGATGAGAAGCAATGGTACAATTATAACTCGAATACTTGTCAAGCTGGTAAAGTATGTGGACACTATACTCAGGTGGTGTGGCGTAAC
TCGGTACGTCTTGGTTGTGCTAGGGTCAGGTGCAACAACGGGTGGTACTTTATAACTTGTAATTATGATCCACCAGGTAACTGGAGAGGACAACG
TCCATATGGTGATCTTGAAAATCAACCGGCTTTTGATTCCAAGTTGGAACTTCCAACTGATGTCTAATTATAAGTTACATGATCAAAAACATGAA
TGAATAAAGTGATCGATTGTCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202366] SGN-U579345 Tomato 200607 Build 2 105 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24027 [Download][View] Facility Assigned ID: TCAAX16TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.981 Expected Error Rate: 0.0041 Quality Trim Threshold: 14.5