EST details — SGN-E202287

Search information 
Request: 202287Match: SGN-E202287
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C10705Clone name: cLEC-6-A18
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C172623 is on microarray TOM1: SGN-S1-1-4.1.20.1
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C172623 [TUS-14-A5] Trace: SGN-T195089 EST: SGN-E393763 Direction: 5' Facility: INRA
Clone: SGN-C172623 [TUS-14-A5] Trace: SGN-T195089 EST: SGN-E398886 Direction: 5' Facility: INRA
Clone: SGN-C172623 [TUS-14-A5] Trace: SGN-T195291 EST: SGN-E393965 Direction: 3' Facility: INRA
Clone: SGN-C172623 [TUS-14-A5] Trace: SGN-T195291 EST: SGN-E398885 Direction: 3' Facility: INRA
Clone: SGN-C172623 [TUS-14-A5] Trace: SGN-T195292 EST: SGN-E393966 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E202287Length: 600 bp (855 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E202287 [] (trimmed) CTCTAGTTTTCTTGTTTGTTTTGTACAAGTTAATGAGGTTCACATGGTTCTTTGAAATCTTAGTGGTTCTCTTCTGCATCGGTGGTGTGGAGGGG
CTACAAACTTGCTTAGTTGCCTTGCTAGCTAGGTGGTTTAAGCCTACGGGAGAGTCATACATTAAAGTACCCATTTTTGGTGCAGTTTCTTATCT
TACTTTGGCTGTTTCGCCATTCTGCATAACTTTTGCAGTGGTTTGGGCAATGTACAGAAATTCTATTTTTGGCTGGATAGGTCAAGACATACTTG
GCATTGCACTTATAATTACAGTTCTGCAAATTGTGCGGATACCTAATCTCAAGGTTGGTTCAGTTCTTTTGGGTTGCGCCTTCATCTACGACATA
TTTTGGGTATTTGCTTCTCAGAGTCTCTTCCATGAAAGTGTGATGATTGTGGAAGCTCGTGGCGATAAAAGTGGAGAAGATGGTATTCCAATGCT
GCTGAAGATTGCACGACTATTTGATCCATGGGGTGGTTACAGCATTATCGGCTTTGGTGACATCCTATTGTCTGGACTGCTAGTATCATTTTTAC
TTAGGTATGATTGGCTTGCAAAGAAGAATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E202287] SGN-U567575 Tomato 200607 Build 2 25 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T23948 [Download][View] Facility Assigned ID: TCAAV09TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0091 Quality Trim Threshold: 14.5