EST details — SGN-E201529

Search information 
Request: 201529Match: SGN-E201529
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C8248Clone name: cLEC-4-N5
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C184909 is on microarray TOM1: SGN-S1-1-6.1.12.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184909 [TUS-46-A3] Trace: SGN-T1855 EST: SGN-E378469 Direction: 5' Facility: Giov. Lab
Clone: SGN-C184909 [TUS-46-A3] Trace: SGN-T198876 EST: SGN-E397550 Direction: 5' Facility: INRA
Clone: SGN-C184909 [TUS-46-A3] Trace: SGN-T200073 EST: SGN-E398747 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E201529Length: 309 bp (524 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E201529 [] (trimmed) GTAAATTCTCCCGTCGTTTCTTCTTTCTCTCTCCGCATCACCGACAGAGAAGAAGAAGAGGAAGGATATACCGATACAGCAATTATTAGGGATTT
GGATATTATTTTTTCAGGTAAAATATACATTTACAACTATTGTTTTCTACAGCTCAGACGATATTCAGCCATTACTCTTTCTCCGGAATTTGCTT
CTCAAACATGTCTTACGCCTATCTCTTCAAGTATATCATCATCGGCGATACCGGAGTTGGAAAATCATGTCTTCTGTTGCAATTTACTGACAAAC
GATTTCAACCAGTTCATGATTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E201529] SGN-U562695 Tomato 200607 Build 2 27 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T24479 [Download][View] Facility Assigned ID: TCAAO75TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0249 Quality Trim Threshold: 14.5