EST details — SGN-C18807

Search information 
Request: 18807Match: SGN-C18807
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C18807Clone name: cLED-24-K15
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C176056 is on microarray TOM1: SGN-S1-1-3.4.11.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176056 [TUS-22-P6] Trace: SGN-T180945 EST: SGN-E368763 Direction: 3' Facility: INRA
Clone: SGN-C176056 [TUS-22-P6] Trace: SGN-T180946 EST: SGN-E368764 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E240740Length: 349 bp (741 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E240740 [] (trimmed) CAGGATGCTAAGGTGATGTCTTGGTGGGATTATGGTTATCAGATCACTGCCATGGGAAACAGGACTGTGATTGTGGATAATAATACCTGGAACAA
CACACATATAGCTACAGTAGGAAGAGCAATGTCATCTTATGAGGATGAAGCATATGAAATAATGAGATCACTGGATGTGGATTATGTATTGGTTG
TGTTTGGAGGTGTAACTGGGTATTCATCTGATGACATAAACAAATTCTTGTGGATGGTGAGGATAGGTGGCGGAGTTTTTCCCGTCATCAAAGAA
CCAGATTACCTTGTTAATGGCGAGTATCGGGTTGACAAAGGTGCTGCGCCTAAGATGTTGAACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240740] SGN-U583597 Tomato 200607 Build 2 33 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T54637 [Download][View] Facility Assigned ID: TOVDO68TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0108 Quality Trim Threshold: 14.5