EST details — SGN-C186012

Search information 
Request: 186012Match: SGN-C186012
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C186012Clone name: TUS-48-O2
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C186012 is on microarray TOM1 spot ID 1-1-7.3.7.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77623 [cLES-2-L16] Trace: SGN-T97235 EST: SGN-E282075 Direction: 5' Facility: TIGR
Clone: SGN-C186012 [TUS-48-O2] Trace: SGN-T188454 EST: SGN-E376414 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E376415Length: 659 bp (896 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E376415 [] (trimmed) AGGTACTAGTAGTTGTGATAATTAAGTAAACCATCAGAGCTTGTTGAGGATTATCTGAGCACCATACTGAGGCTTCATAACGAGTATTGCCTGAG
GGGCATGAACATAGGAAGGAGAGAGCTTGAACCAAAACCTCTGCAGAATTTGAGATAAAACGAGCTTTGCTTCTGCCATTCCAAAGTTATTACCA
ATGCACATTCGAGGACCCCAACCGAAGGGGAAATACAATGGCTCTTTTGCAGCTTTGGATACCCCTTCTGAGAACCTATTTGGATTGAAAATCAG
TGCATCGTCTCCCCATACTTGGGGGTCGCGATGTGCTATGTATATAGGCACAAAAATTTGTACCTGCCCGGACCTGCCCGGGCGGCCGCTCGAGG
CCGAGGTACATTCAGAGCACATGTGCTACCTCTGGAGAAGGGTTGTATGAGGGGCTTGACTGGCTCTCAAACAACATTGCAAACAAGGGTTGAAC
ATGAGATCCATGATTTTTGCAGCTATATTTTTGTCAATATAGACTTCAACAATGTCTAAAACACTTGTGCACCATGCGAGATGGATCCACTTATC
AGTATTATTTTTTTTTCAGTACCTGCCCGGGCGGCCGCTCGAGGCCGAGGTTGAAATTCAAATGTTAAATCTATTGGATTTCAGACTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E376415] SGN-U593483 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T188455 [Download][View] Facility Assigned ID: FA0AAD36BH01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0037 Quality Trim Threshold: 14.5