EST details — SGN-C185629

Search information 
Request: 185629Match: SGN-C185629
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185629Clone name: TUS-47-O3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185629 is on microarray TOM1 spot ID 1-1-6.3.9.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C22091 [cLED-36-H19] Trace: SGN-T57803 EST: SGN-E241633 Direction: 5' Facility: TIGR
Clone: SGN-C185629 [TUS-47-O3] Trace: SGN-T192603 EST: SGN-E391277 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390771Length: 730 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390771 [] (trimmed) GTAAATTAAAAAAGAATGAGGAAAAAAACCTCACACACCCAAATATCTAATCCTTTTTTATACAGTCACCTCTTTTCAAGTACCAAAAACTTCTA
AAAAATGTCTATTTTAGCACCAAATTCCCAAATTTTGTACAGAGAAATCTACAATAGGGAGAATCAGCATCTGTTTTTGAACAGTGGAGGGAATG
TTAATATTGTAAAATCATATGGATTTTGTTTTGTTGATAAAAGAAGAGGTGATTGGAAGAAGAAAATGAAAAGGGAGTTAAGAATTCATGCCTCT
TGGCCAGATTTGTCAAGACCAGCTGCTGTTGAGATGCAACCAATTGAGAGTAGTGAACAACTTGATCAGATTTTAGACTCTGCTAAAGAGCTTTC
ACAACCTGTCATCATTGATTGGATGGCAGCTTGGTGCCGGAAATGCATATATTTGAAGCCTAAATTGGAGAAACTTGCTGCTGAGTTTGATACCA
AAGTCAAATTCTACTATGTGGATGTCAATAAAGTGCCACAAACTTTAGTGAAGAGAGGAAACATCTCAAAAATGCCAACAATTCAGTTGTGGAAA
TATGGAGAAATGAAAGCTGAGGTGATTGGAGGGCACAAGGCGTGGCTTGTAATTGAAGAAGTGAGAGAAATGATCAAAAACTTTGTGTAGTTATT
ACTAGTCCAATTAAACAAATTATTTATTTTGCTATGTCAAAAGTTTGACATNCATTGGTATATTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390771] SGN-U570719 Tomato 200607 Build 2 20 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192097 [Download][View] Facility Assigned ID: FA0AAD35AH02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.938 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5