EST details — SGN-C185576

Search information 
Request: 185576Match: SGN-C185576
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185576Clone name: TUS-47-L22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185576 is on microarray TOM1 spot ID 1-1-3.4.9.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76849 [cLES-19-J11] Trace: SGN-T101877 EST: SGN-E287820 Direction: 5' Facility: TIGR
Clone: SGN-C185576 [TUS-47-L22] Trace: SGN-T197780 EST: SGN-E396454 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E396367Length: 734 bp (872 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E396367 [] (trimmed) CAGAGGTACATGTCAGACTGGTGATTGTGGTGGAGTCTTACAGTGTACCGGATGGGGCAAACCCCCAAACACCCTAGCCGAGTACGCCTTGGACC
AGTTTAGCAACTTAGATTTTTGGGACATTTCTTTAGTCGATGGATTTAATATTCCAATGACTTTTGCCCCAACAAAACCTAGTGGAGGAAAATGT
CACGCAATTCATTGCACGGCCAATATAAATGGTGAATGTCCTCGCGCCCTTAAGGTACCTGGAGGATGTAACAACCCTTGTACCACGTTTGGAGG
ACAACAATATTGTTGCACCCAAGGTCCATGTGGCCCTACAGAGTTGTCCAAATTTTTCAAGAAAAGATGTCCCGATGCTTATAGCTACCCACAAG
ACGATCCTACAAGCACATTTACTTGCCCTGGTGGTAGTACAAACTATAGGGTTGTCTTTTGTCCTAATGGTGTTGCTGATCCAAATTTCCCCTTG
GAGATGCCTGCAAGTACTGATGAAGTGGCCAAGTGAATTTGAGTTTCTTCATTTTAAATCGCCTCAATTAGTCAACTGATCTCTACCGTAATGAA
AAATCTTAATAGCTCAGTTTTTTAAATATTCACTTTTACTTTATTGATAAGAGTTCGTAACAAACTTAAAGACCGGAATAAGAGTTACATCTCAT
GTGTACTTTTGTCTTAAATGTATAAAACAACAGTGCATTTGAATTATCGGTCTTTTTTTTTAAAAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E396367] SGN-U579414 Tomato 200607 Build 2 213 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T197693 [Download][View] Facility Assigned ID: FA0AAD35DF11RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 1.0000 Quality Trim Threshold: 14.5