EST details — SGN-C185500

Search information 
Request: 185500Match: SGN-C185500
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185500Clone name: TUS-47-I18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185500 is on microarray TOM1 spot ID 1-1-7.1.9.8 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C79330 [cLES-8-J14] Trace: SGN-T99117 EST: SGN-E288597 Direction: 5' Facility: TIGR
Clone: SGN-C185500 [TUS-47-I18] Trace: SGN-T192192 EST: SGN-E390866 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390629Length: 434 bp (857 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390629 [] (trimmed) CAGGTGCAATCTCGTGTCAACCTAAGTAGCAGAAAAATGGCTCCAATCGCCGTTGGTGACGTCATCCCCGATGGTACCGTATCTTACTTCGACGA
GCAAGATCAGATGCAGACCGTCTCAGTATACTCACTTGCTAAGGGCAAGAAGGTCATCATCTTCGCCGTTCCCGGAGCTTTCACTCCCACTTGCA
GCATGAAGCATGTGCCTGGCTTTATTGAAAAGGCTGCTGAGTTGAAGTCAAAGGGTGTCGATGAAATCCTCTGCATCAGTGTCAATGACCCCTTT
GTGATGAAGGCCTGGGCAAAAACTTACCCTGAGAACAAACATGTAAAATTTCTTGCTGATGGAGCTGGAAAATACACCCATGCCCTTGGGCTGGA
GCTTGATCTGTCGGATAAGGGGCTTGGTGTTGGGGGGGGGAAGGTATGCTCTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390629] SGN-U579086 Tomato 200607 Build 2 92 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T191955 [Download][View] Facility Assigned ID: FA0AAD35BE09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0029 Quality Trim Threshold: 14.5