EST details — SGN-C185178

Search information 
Request: 185178Match: SGN-C185178
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C185178Clone name: TUS-46-L8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C185178 is on microarray TOM1 spot ID 1-1-1.4.12.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C92454 [cLEX-11-F21] Trace: SGN-T116919 EST: SGN-E304563 Direction: 5' Facility: TIGR
Clone: SGN-C185178 [TUS-46-L8] Trace: SGN-T192273 EST: SGN-E390947 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E390700Length: 700 bp (880 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E390700 [] (trimmed) TCGCTCTCTCTGTAAATCGAAGAAGAAAAAAATGTTGCTGGGGAAGAGGACTCGGCCACCGATGAAGAGAACAACAAGTATGACAGAATTCACTT
TAGATCTCAATCTCAATAATCCTGACCCTAATTCTTCTCTTAGTAATTACAATAATCCATTCGATCCTCACAATCCTTTTTCACCTGCAAACACC
CAGCAGCAACACCTAGATCAACAACGTTTATTGACAGCAGCGAAAACCGTTTCCGTCAGAAACCGCCGTAAATCTGCTGATTTTCTAGAAACTGC
TAATTTTTTGAAAGCTTGCTTCCTCTGTAAACGCCGGTTAATCCCTGGCCGGGATATCTACATGTACAGAGGAGATAGTGCTTTTTGCAGTCTAG
AGTGTAGACAGCAGCAGATGAATCTAGATGAGAAGAAGGACAAGTGTTCGTTGGTTGCATCTAGAAAGGACTACATGAAGAACTCCGTCGCTGCC
GCCGTAGCCGGCGGGAAGGGATCTGACGTTTCCGCCACAAGCGAGACTGTCGCCGCCGTTTAGGTAGTGGAAATTTTTAGTAGACGCCATGTATG
GATCATGAATCAAACGTGATGTGGGTAATCAGTACGTTACCCACACAACCACCAAAAAATGCATATCAAAGCTGCTATATAATATGTATATGTAT
ATACATGTTGTTAAGAAGTAAAATCTGCATGATGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E390700] SGN-U580528 Tomato 200607 Build 2 56 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T192026 [Download][View] Facility Assigned ID: FA0AAD34DF04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.979 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5