EST details — SGN-C184720
| Search information |
| Request: 184720 | Match: SGN-C184720 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C184720 | Clone name: TUS-45-I6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C184720 is on microarray TOM1 spot ID 1-1-3.1.14.9 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83841 [cLET-26-F21] | Trace: SGN-T108870 | EST: SGN-E296818 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E378230 | Length: 375 bp (1099 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E378230 [] (trimmed)
GTTCAGGGAGAAGAAGGCGACATCTATTATCAAGGTCTTCGACCATGCTGTTGGAATCATATGTGTCCATGAAGCTGGAGGGAAGGTGACTGACT
GGGAAGGAAGTTCACTTGATTTTGCAGCAGATCAAACTGAACGGAGACTCATCTTTCCTTCAGGCGGTGTTCTTGTGACTAATGGGAGCTTACAT
AGCAAGATTATCGAAATGATCTCTTCAAATTCATCAGTTCTTTGACAGGCTTTTGGCATTATTGTGACAAAATCAATAGTCAGATACTAATGAAG
ATTTCCTCCATTCATCATTTGTTTAATGACACTTGCATTCTTTTGACGAATCACAGCATATAGAAGTATACATATCAATGTCTCTCCTTT
GGGAAGGAAGTTCACTTGATTTTGCAGCAGATCAAACTGAACGGAGACTCATCTTTCCTTCAGGCGGTGTTCTTGTGACTAATGGGAGCTTACAT
AGCAAGATTATCGAAATGATCTCTTCAAATTCATCAGTTCTTTGACAGGCTTTTGGCATTATTGTGACAAAATCAATAGTCAGATACTAATGAAG
ATTTCCTCCATTCATCATTTGTTTAATGACACTTGCATTCTTTTGACGAATCACAGCATATAGAAGTATACATATCAATGTCTCTCCTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E378230] | SGN-U568173 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T1846 [Download][View] | Facility Assigned ID: TUS45I6.ab1 |
| Submitter: Koni | Sequencing Facility: Giov. Lab |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0140 | Quality Trim Threshold: 14.5 |
Working
