EST details — SGN-C183795

Search information 
Request: 183795Match: SGN-C183795
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183795Clone name: TUS-43-B17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183795 is on microarray TOM1 spot ID 1-1-8.2.18.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C4104 [cLEC-23-I8] Trace: SGN-T28284 EST: SGN-E206325 Direction: 5' Facility: TIGR
Clone: SGN-C183795 [TUS-43-B17] Trace: SGN-T197927 EST: SGN-E396601 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E398592Length: 601 bp (874 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E398592 [] (trimmed) CAAAAGCGTTCCCCTGCAGGGACACTCACATTTCATCGGAACAGCATGTGTGGAACACCTGCAAGAAGTGTGGGATGGCGCGATCCTGGATTCAT
ACATACAAGTTTCCTTAAAGATTTGTGGCCAAACATGGAGTACACATACAAGTTAGGTCACATGTTAAACAATGGTTCCATTGTTTGGAGTAAGC
AATATTCGTTTAAGTCTGCTCCATTTCCGGGGCAAGAGTCATTGCAACGTATCGTGATATTTGGAGATATGGGGAAGCAAGAGCGCGATGGCTCA
AATGAATATGCTAATTATCAGCCAGGTTCACTTATGACAACTGACACTCTTATTAAGGACCTTGATAACATTGACGCGGTCTTCCTTATTGGAGA
TCTCCCCTATGCCAACGGATATATCTCACAATGGGATCAATTTACCGCGCAAGTAGAGCCAATAACATCGAGAGTACCTTTCATGATTGCAAGCG
GTAATCATGAAAGAACATGGGAGAACACTGGATCATTATACACCGGTATAGATTCGGGTGGAAAATGTGGTGTACCAGCTTAAAACATTATACTA
TGTCCCTGCAAAAAAAAAAGCTAACTTTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398592] SGN-U586186 Tomato 200607 Build 2 67 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199918 [Download][View] Facility Assigned ID: FA0AAD31CA09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.976 Expected Error Rate: 0.0028 Quality Trim Threshold: 14.5