EST details — SGN-C183566

Search information 
Request: 183566Match: SGN-C183566
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183566Clone name: TUS-42-I4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183566 is on microarray TOM1 spot ID 1-1-5.1.2.21 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C81885 [cLET-18-L9] Trace: SGN-T107216 EST: SGN-E293391 Direction: 5' Facility: TIGR
Clone: SGN-C183566 [TUS-42-I4] Trace: SGN-T195037 EST: SGN-E393711 Direction: 3' Facility: INRA
Clone: SGN-C183566 [TUS-42-I4] Trace: SGN-T195038 EST: SGN-E393712 Direction: 5' Facility: INRA
Clone: SGN-C183566 [TUS-42-I4] Trace: SGN-T195039 EST: SGN-E393713 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E399269Length: 488 bp (926 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E399269 [] (trimmed) GTAGAAAAGGCAGAATTTGGAGACAATGAGTGGTATTTTTTTACCCCTAGAGATAGAAAATATCCAAATGGTGTTAGGCCAAATAGAGCAGCTGT
GTCAGGTTATTGGAAGGCTACTGGCACTGATAAAGCAATTTATAGTGCAAATAAATATGTTGGAATTAAAAAAGCACTTGTTTTTTACAAAGGCA
AACCACCAAAAGGTGTCAAGACTGATTGGATCATGCATGAATATCGTTTGAGTGATTCAAAGTCTCAAACATCTAAGCAAAGTGGATCTATGAGG
TTAGATGATTGGGTACTATGTAGAATTTATAAGAAGAAAAATTTGGGGAGAACTATAGAGATGATGAAAGTTGAAGAAGAAGAATTAGAGGCACA
AAATGTGAGTACTACAAATAATGAAATTGAAGTTGTTGGTGGACCACAAACAATGAAATTACCAAGAATTTGTTCATTGTCACATCTATTGAAAT
TGGGATTATTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399269] SGN-U566039 Tomato 200607 Build 2 78 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195038 [Download][View] Facility Assigned ID: FA0AAD30BE02RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.926 Expected Error Rate: 0.0031 Quality Trim Threshold: 14.5