EST details — SGN-C183298

Search information 
Request: 183298Match: SGN-C183298
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C183298Clone name: TUS-41-M24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183298 is on microarray TOM1 spot ID 1-1-1.1.3.15 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C62337 [cLEM-21-E12] Trace: SGN-T86700 EST: SGN-E272702 Direction: 5' Facility: TIGR
Clone: SGN-C183298 [TUS-41-M24] Trace: SGN-T199487 EST: SGN-E398161 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E398410Length: 642 bp (810 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E398410 [] (trimmed) GCAGAGAATGAAATATTTCACACACTCTCATTTTTAGCAGGAGTTATGGTTTGGTCACAGATCACCGATCTGCCATTTTCGTTGTATTCAACCTT
TGTTATCGAGGCCCGCCATGGGTTCAACAAGCAAACAGTGTGGTTATACTTCAGGGATATGATAAAAGGAATTGCTTTATCTATTGTGATTGGTC
CTCCCATTGTGGCTGCCATTATTGTTATAGTGCAGAAAGGAGGTCCTTACTTGGCAATTTACTTATGGGGATTTATGCTGGTTTTGTCTCTTGTT
ATGATGACTATCTACCCAGTACTAATTGCTCCACTTTTCAACAAGTTCACTCCGCTTCCACAGGGAGAGCTTAGATTGAAGATCGAGAATCTTGC
ATCCTCACTCAAATTTCCCCTAAAGAAATTGTTTGTTGTTGATGGCTCCACAAGGTCAAGCCATAGCAATGCATACATGTACGGATTCTTCAAGA
ACAAGCGCATTGTCCTCTATGATACACTCATCCAGCAGTGCAAGAATGATGAGGAAATCGTTGCTGTTATTGCACACGAGCTTGGTCACTGGAAA
CTTAATCACACAATGTACTCCTTTATTGCTGTTCAGATTCTCACGTTCTTGCATTTTGGAAGGTACACTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398410] SGN-U578791 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199736 [Download][View] Facility Assigned ID: FA0AAD29BG12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.973 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5