EST details — SGN-C182969

Search information 
Request: 182969Match: SGN-C182969
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C182969Clone name: TUS-40-P7
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C182969 is on microarray TOM1 spot ID 1-1-2.4.5.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C133224 [cTOD-5-C6] Trace: SGN-T142866 EST: SGN-E330073 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E394139Length: 205 bp (989 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E394139 [] (trimmed) GGAGAGAGTAATCCACAAACTACTTCTTAATTTGTGAAAAAATAGTGTGCAAGTAATATTATTGTGAGTTGTAAAAATAAAAAAGTGTTGAATAG
TAGTCTTTTGACACTACCAAGTTTTTCATCAATATATTGTATTACTTATTCGGGTATCATATTTACCCATTTAATATTTGGTGTCGTTGTTACTC
TCTTCCTATTGCTAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E394139] SGN-U576964 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195465 [Download][View] Facility Assigned ID: FA0AAD28CH04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.907 Expected Error Rate: 0.0007 Quality Trim Threshold: 14.5