EST details — SGN-C181487
| Search information |
| Request: 181487 | Match: SGN-C181487 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C181487 | Clone name: TUS-37-B13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: SGN-C181487 is on microarray TOM1 spot ID 1-1-4.2.12.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C62405 [cLEM-21-H6] | Trace: SGN-T86780 | EST: SGN-E272782 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C181487 [TUS-37-B13] | Trace: SGN-T199289 | EST: SGN-E397963 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E392710 | Length: 572 bp (841 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E392710 [] (trimmed)
AATTATTTATCAATTTCCTTCGATAAATCCAATTTTCTTCTTCAAACGCTCAATCTAAACCCCCAAATCGCCAATTGCAAAGAAAACCAAGTACC
AAATTCGAACAAAAAATGGCAAAACCAGATGAAATTCACACCATTTCGTTATCATTCACTGATTTCCCAGAAGATGTGCAGCTTTGTATCCTCTC
ATTCCTCACTCCATCAGATATCTCCAATTTCGCCTGTACTTCAAAACGCTTCGAATACCACATTCATTGAGTCACCTTTATCTTCAGAGGAAGAG
AACATATATGAGGGTCGTATGCATATTCAGCCCCTTGCTGAAGCTGATGACTTATGTGATATTCTGCCTAGTGCTGATAAGAGAGTAATTTTGTG
CATGCTTTGCATGAACTCAAGCTACGACTTGGTTATTCCTGATTTGGCAGGAAGCACCGTTAATCCTAGGCAGGCGGAGGGAAGGATTTGGCAGT
ATGAAAATGGAACCTTTGGTTTTGGGTTTCTGCGAGACAATTACGTTATAGACTTGAGATGTATTGCTCAGAATGGTCGGATATTGGAGGCAGCA
TA
AAATTCGAACAAAAAATGGCAAAACCAGATGAAATTCACACCATTTCGTTATCATTCACTGATTTCCCAGAAGATGTGCAGCTTTGTATCCTCTC
ATTCCTCACTCCATCAGATATCTCCAATTTCGCCTGTACTTCAAAACGCTTCGAATACCACATTCATTGAGTCACCTTTATCTTCAGAGGAAGAG
AACATATATGAGGGTCGTATGCATATTCAGCCCCTTGCTGAAGCTGATGACTTATGTGATATTCTGCCTAGTGCTGATAAGAGAGTAATTTTGTG
CATGCTTTGCATGAACTCAAGCTACGACTTGGTTATTCCTGATTTGGCAGGAAGCACCGTTAATCCTAGGCAGGCGGAGGGAAGGATTTGGCAGT
ATGAAAATGGAACCTTTGGTTTTGGGTTTCTGCGAGACAATTACGTTATAGACTTGAGATGTATTGCTCAGAATGGTCGGATATTGGAGGCAGCA
TA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E392710] | SGN-U583423 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T194036 [Download][View] | Facility Assigned ID: FA0AAD25CA07RM1 |
| Submitter: Koni | Sequencing Facility: INRA |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |
Working
