EST details — SGN-C180923

Search information 
Request: 180923Match: SGN-C180923
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C180923Clone name: TUS-35-K1
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C180923 is on microarray TOM1 spot ID 1-1-8.3.17.12 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C35821 [cLEG-36-H4] Trace: SGN-T71037 EST: SGN-E255754 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E375646Length: 888 bp (untrimmed)
Status: Current VersionDirection: 5'
>SGN-E375646 [] (untrimmed)
AAAGCTATCGCCGNCTCGAATTACCCTACTAAAGGGACAAAAGCTGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGC
CGGGCTGAAACGGGTGGTGAAAAAAGAACTGGCGGACGGCAGCGTCACGCGCAGCGGGTATGACGCGGCAGGAAGGCTCACGGCGCAGACGGACG
CGGCGGGACGGAGGACAGAGTACGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTAT
AACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATC
GCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGGCAGCACCCGGCAGATGA
CCTGGAGCCGCTACGGGCAGTTGCTGGCGTTCACCGACTGCTCGGGCTACCAGACCCGTTATGAATACGACCGCTTCGGCCAGATGACGGCGGTC
CACCGCGAGGAAGGCATCAGCCTTTACCGCCGCTATGACAACCGTGGCCGGTTAACCTCGGTGAAAGACGCACAGGGCCGTGAAACGCGGTATGA
ATACAACGCCGCAGGCGACCTGACTGCCGTTATCACCCCGGACGGCAACCGGAGCGAGACACAGTACGAGGGGGGGGCCCGGTACCCAATTTCGC
CCTATAGTGAGTCGTATTACAATTCACTGGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCCTGGCGTTCCCCAACTTAATCGCCTTGCAG
CACATTCCCCTTTTCGCCGGCTGGCGTAATTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T187414 [Download][View] Facility Assigned ID: FA0AAD23AF01RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Problems: E. Coli (cloning host) sequence detected
Sequence Entropy: 0.947 Expected Error Rate: 0.0005 Quality Trim Threshold: 12.5