EST details — SGN-C179794

Search information 
Request: 179794Match: SGN-C179794
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179794Clone name: TUS-32-K24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179794 is on microarray TOM1 spot ID 1-1-1.3.1.20 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80836 [cLET-13-I21] Trace: SGN-T105904 EST: SGN-E294061 Direction: 5' Facility: TIGR
Clone: SGN-C179794 [TUS-32-K24] Trace: SGN-T185938 EST: SGN-E372443 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372444Length: 623 bp (873 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372444 [] (trimmed) CCAATCAAAATATATATATCATATATACTNTCTTTGCCTTCCATTAGACATTAGTATAGTACACATGCATAAGATAATGCCACTAGTAGTAAACA
AACCAAAAGTAAGATAAAATAGAGCTCCCACCTTCTTTGCTTCATTAATACAACCAAATTTAACTCATAAAATCCACCGTATTTCATCAAAATAC
ATGTCTTAGAGGACTCGACGATGGGTCCTTACACTCAAGAGAGTCACATCATCGACCACAGGGCCACACAGGGAAACAAAATCATCACTCCTCGT
GTGATAGTAGGTGCTAAGGAACATGATCCTAGTCCGGCTAGCAGTGGCCTTGAAACGGAGGATAGCACGCTTATATCCACCTTTTCCCATAGACT
CATATGGGACTTTAAGTGTATCCCTTCCAGCAAAGGCCTCAACAATCATAGAACCTTCACAAGCATTACTTGCATCTCCAACTTTGAAACTAAGT
TGGTACATTTTGCCAATTGTGGTTCTTGCAACTTGAGCAATGGCACTTTCTTTACCAGCAACTAACTCTATGGCTCTCTTGCCATGTGGTACTGA
AAAATGGTCAGAGTCTAAGTATTTTACTGCCTTTAGGGACTCAACCATCCATG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372444] SGN-U577602 Tomato 200607 Build 2 44 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185939 [Download][View] Facility Assigned ID: FA0AAD20BF12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 0