EST details — SGN-C179698

Search information 
Request: 179698Match: SGN-C179698
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179698Clone name: TUS-32-G24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179698 is on microarray TOM1 spot ID 1-1-1.3.1.19 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80246 [cLET-11-K4] Trace: SGN-T105142 EST: SGN-E292679 Direction: 5' Facility: TIGR
Clone: SGN-C179698 [TUS-32-G24] Trace: SGN-T185916 EST: SGN-E372421 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372422Length: 698 bp (874 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372422 [] (trimmed) CAGAAACAGAGAGGAACACAAGACATTTGATCAACAAAAAAAGGGGTAAAATTATGGCTGCCTCTCTACAAGCAGCTGCTACTCTTATGCAACCG
ACAAAGGTTGGTGTTAGAAACAACCTGCAGTTGAGGTCTGCTCAAAGTGTGAGCAAAGCATTTGGTGTTGAACAAGGTTCAGGCAGGCTTACTTG
CTCTTTGCAAACTGAAATCAAGGAATTGGCTCAGAAATGTACTGATGCTGCCAAGATTGCTGGTTTTGCTCTTGCCACCTCTGCCCTCGTCGTCT
CGGGAGCAAATGCGGAAGGAGTTCCAAAACGTTTAACCTATGATGAAATCCAAAGTAAGACATATATGGAAGTAAAGGGAACTGGAACTGCTAAC
CAATGTCCTACCATTGAAGGAGGTGTTGGCAGCTTTGCCTTCAAACCAGGCAAATACACTGCCAAGAAATTCTGCCTAGAGCCCACATCATTCAC
AGTCAAGGCAGAGGGTGTCAGCAAGAACTCAGCCCCAGACTTCCAAAAAACCAAGCTCATGACACGCTTAACCTACACTCTTGATGAGATTGAGG
GACCATTTGAAGTGTCTCCGGATGGCACTGTTAAGTTTGAGGAGAAGGATGGAATTGATTATGCTGCTGTTACAGTTCAGCTTTCTGGTGGTGAG
CGTGTGCCCTTTCTCTTTACTATCAAACAGCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372422] SGN-U580023 Tomato 200607 Build 2 214 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185917 [Download][View] Facility Assigned ID: FA0AAD20BD12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0035 Quality Trim Threshold: 14.5