EST details — SGN-C179622

Search information 
Request: 179622Match: SGN-C179622
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179622Clone name: TUS-32-D20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179622 is on microarray TOM1 spot ID 1-1-5.4.1.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80077 [cLET-11-D11] Trace: SGN-T105335 EST: SGN-E292872 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E372732Length: 550 bp (913 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E372732 [] (trimmed) TCTCTCTCTACTTTCTTTCTCTTAACACTGAGCAGTAAGCGAGTGAGTATGAGAAAAATGGCTGCCAATATGATGCTCTACATTACTATTACTGT
TCTTCTCTGTTTTCTCACTGCCGTCAATGCCAGAATCCCCGGCGTTTATACCGGCGGACCATGGCAAACCGCCCACGCCACCTTCTACGGTGGCT
CTGACGCATCTGGAACTATGGGTAATTACTATACTCTCTCTCTCAGTTGCAGAGCTTGAATCCAGTAGCAGTAGCTTTTACTCAAACAATGTTAA
GTAGTTCGCTAAATATATACAAATATTAGATTTAGAACTCAGTTATTGGTATTAGAAGTGAAAAGCTATATTTGAAAAATCGAAGTTGTGTTTAG
TTATGAATACTTACTGGAGTTGTTTTTGAATTGTTGTGAATAATTTAGAGTGAAGATATAACTTCTCTTCGAGTTGAATTTTGAAATTTTCGGAA
ATGTAATGGCTAAATGTGTTTTCATAGCCTTGTTCATAGATTAATAATTAATAAAATTGCAAATCTGGATCCCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372732] SGN-U578013 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T186213 [Download][View] Facility Assigned ID: FA0AAD20DB10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.952 Expected Error Rate: 0.0006 Quality Trim Threshold: 12.5