EST details — SGN-C179421

Search information 
Request: 179421Match: SGN-C179421
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179421Clone name: TUS-31-L11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179421 is on microarray TOM1 spot ID 1-1-6.4.2.13 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82213 [cLET-1-E15] Trace: SGN-T102355 EST: SGN-E292081 Direction: 5' Facility: TIGR
Clone: SGN-C82213 [cLET-1-E15] Trace: SGN-T102559 EST: SGN-E292285 Direction: 3' Facility: TIGR
Clone: SGN-C179421 [TUS-31-L11] Trace: SGN-T185415 EST: SGN-E373277 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E373278Length: 709 bp (919 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E373278 [] (trimmed) GAAGAACAGCAGACGCAATGGGTGCTTACACTTATGTGTCGGAGCTATGGAGGAAGAAGCAGTCGGATGTTATGAGGTTCTTGCAAAGGGTGAGG
TGCTGGGAGTACCGTCAACTCCCTTCTATCGTCCGTGTCACCAGGCCTACACGTCCTGACAAGGCACGCCGCTTGGGATACAAGGCCAAGCAGGG
TTATGTGGTCTATCGTGTTCGTGTGAAACGTGGTGGAAGGAAGAGGCCTGTTTCAAAGGGTATTGTGTATGGTAAGCCCACCAACCAGGGAGTCA
CACAATTGAAGTTCCAGCGCAGCAAGCGATCTGTTGCTGAGGAGCGTGCTGGAAGGAAGTTGGGTGGTCTTAGAGTCCTGAACTCCTACTGGATT
AATGAGGATTCTACCTACAAGTACTTTGAGGTAATATTGGTTGACCAGGCTCATGCTGCTATCCGCAATGATCCAAGGATCAACTGGATCTGCAA
CCCAGTGCATAAGCACAGAGAATTGCGTGGTCTTACTTCAGCTGGTAAGAAATACAGAGGACTCCGAGGAAGAGGACATCTCCACCACAAGGCTC
GCCCCTCAAGAAGGGCAACCTGCAAAAGGAACCAGACTCTGTCTCTCCGTCGTTACCCGTTGATCTGCTTGACCTTTTTGAGAGGAGTGTCGCTT
GCTTAATTTTTTGCTTTATCTGGTTTTAAGCCCTTTTATCTTGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E373278] SGN-U565714 Tomato 200607 Build 2 97 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T185416 [Download][View] Facility Assigned ID: FA0AAD19CF06RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.989 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5