EST details — SGN-C179034

Search information 
Request: 179034Match: SGN-C179034
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C179034Clone name: TUS-30-L8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C179034 is on microarray TOM1 spot ID 1-1-1.4.3.18 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C78607 [cLES-6-D15] Trace: SGN-T98462 EST: SGN-E287010 Direction: 5' Facility: TIGR
Clone: SGN-C179034 [TUS-30-L8] Trace: SGN-T184875 EST: SGN-E372083 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E372084Length: 688 bp (901 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E372084 [] (trimmed) GTTCCTTTTAGTTTCTTCAACAATGTTACGTGTTTATTACTATGCAAGAGTTAAAATCATATTGTTTCTCAAAATATTGTAATATAAAAGTAAGT
AGGTAATGATTCCCTGCATTAAGGAAAACTTCTGTCGTTTTGCCCGAATTTTACAAGTTATGTACAAGTCATTATACAATCTGATGCAACTGATA
AGACCCATCAAGCACAAAGGAGATTTCTTTTTGATTTGTGGCTACTGATTCTGAAACTTCTTGTCTTCAGACAATTGCGGAGACAGTCGGTGATT
GGTACTTCAGTAGAAACATCAGCAAGGAGATTGATTGTGCATATCCCTGTGATACTACATGCCACCACATGATTTGACGCAGAGATCCAATGTTG
CTAGTCATAATGCTGATCTTCAAAGGGTAATTGGAACCCAGAAACTCAGCTATACAAAGCCATAGACAACCTTGGTTACATAGCGCAGATTAGTT
CATTTATAAGGGGGTGCAGGGAAGGAATAGGTGTTATATACATATATACTCATATTGCAGAGTAAGAAACAAACATTCTTTTATTTAGAGAGGTT
CACAGAGAGCAAATGTATACATCGTCGTCTAGAAAAGGATATGGTACAGATCCATGATGTGCAGAATGTCGCACCGCTGAGTCTGAAAATTTCAT
GTTCAGATATTANGCCAAGAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E372084] SGN-U565776 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T184876 [Download][View] Facility Assigned ID: FA0AAD18DF04RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.964 Expected Error Rate: 0.0033 Quality Trim Threshold: 12.5