EST details — SGN-C177983

Search information 
Request: 177983Match: SGN-C177983
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C177983Clone name: TUS-27-P13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C177983 is on microarray TOM1 spot ID 1-1-4.4.6.14 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64372 [cLEM-5-P14] Trace: SGN-T85133 EST: SGN-E271328 Direction: 5' Facility: TIGR
Clone: SGN-C177983 [TUS-27-P13] Trace: SGN-T183195 EST: SGN-E370958 Direction: 3' Facility: INRA
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Sequence 
Sequence Id: SGN-E370959Length: 661 bp (881 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E370959 [] (trimmed) GCAAAAGCCAAAGATGGTTGTTCTGTGGAGCCAATTGGTCATTAAATCAGTGCTTTTAGTCTGTAGCATTATTTCTCTCTGCTTATATAGTGGCA
GAGCAGAGGTTAAAGTAGAAAATTTTAGTTTGGAAAATAAAGGGGTTGTAAGCAATAGCAAGTGCAATTTGTTTCAAGGTAGATGGGCAATTGAT
CCTTCTTTTCCACTTTATGATTCCTCAAAGTGCCCTTTCATTGACCCTGAATTTGATTGCCTCAAATATGGTCGCCCTGATAAACAATACCTCAA
ATATGCTTGGAAACCTGATTCTTGTAACTTGCCCAGGTTTAATGGGAAGGATTTGTTGCAGAGATGGTCAGGGAAAAAAATAATGTTTATTGGTG
ACTCGTTGAGTTTGAACATGTGGAATTCTCTGGCCTGTATGTTACATGCGTCGGTGCCCAATGCAAAAACTACAATTTCTAGGAAGGAGACACTT
TCTTCTGTCACTTTTCAGGACTACGGAGTTACATTATTTCTTTATCGAACAACTTACCTTGTGGATATAGTAAGAGAGAAGATTGGAAGGGTATT
GAAATTGAATGCCATTCAACAAGGTGATGCTTGGAAAGGAATGGATGTGTTAATTTTCAATTCTTGGCATTTGTGGACTCACAAGGGCAAC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E370959] SGN-U571214 Tomato 200607 Build 2 120 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T183196 [Download][View] Facility Assigned ID: FA0AAD15CH07RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0022 Quality Trim Threshold: 14.5